Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-2Q5R1B6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Gm12585-201ENSMUST00000117307 290 ntBASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-2Q5R1B6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-2Q5R1B6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Gm15393-201ENSMUST00000120499 219 ntBASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-2Q5R1B6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms