Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msx2Q03358 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msx2Q03358 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msx2Q03358 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msx2Q03358 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Msx2Q03358 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.45□□□□□ -0.1
Msx2Q03358 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.45□□□□□ -0.1
Msx2Q03358 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.45□□□□□ -0.1
Msx2Q03358 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.45□□□□□ -0.1
Msx2Q03358 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msx2Q03358 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.45□□□□□ -0.1
Msx2Q03358 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Msx2Q03358 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Msx2Q03358 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Msx2Q03358 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.44□□□□□ -0.1
Msx2Q03358 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Msx2Q03358 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.44□□□□□ -0.1
Msx2Q03358 Olfr129-201ENSMUST00000122318 993 ntBASIC14.44□□□□□ -0.1
Msx2Q03358 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Msx2Q03358 Gm25745-201ENSMUST00000174945 133 ntBASIC14.44□□□□□ -0.1
Msx2Q03358 Mir3081-201ENSMUST00000175305 84 ntBASIC14.44□□□□□ -0.1
Msx2Q03358 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.44□□□□□ -0.1
Msx2Q03358 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.44□□□□□ -0.1
Msx2Q03358 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.44□□□□□ -0.1
Msx2Q03358 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.44□□□□□ -0.1
Msx2Q03358 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Msx2Q03358 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx2Q03358 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Msx2Q03358 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Gm12008-201ENSMUST00000117791 755 ntBASIC14.43□□□□□ -0.1
Msx2Q03358 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.43□□□□□ -0.1
Msx2Q03358 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.43□□□□□ -0.1
Msx2Q03358 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Msx2Q03358 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.43□□□□□ -0.1
Msx2Q03358 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.43□□□□□ -0.1
Msx2Q03358 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Msx2Q03358 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Msx2Q03358 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msx2Q03358 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.43□□□□□ -0.1
Msx2Q03358 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.42□□□□□ -0.1
Msx2Q03358 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Msx2Q03358 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.42□□□□□ -0.1
Msx2Q03358 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.42□□□□□ -0.1
Msx2Q03358 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms