Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Mir8102-201ENSMUST00000184148 139 ntBASIC12.82□□□□□ -0.36
Nkx3-1P97436 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Gm29541-201ENSMUST00000191351 678 ntBASIC12.82□□□□□ -0.36
Nkx3-1P97436 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.82□□□□□ -0.36
Nkx3-1P97436 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.82□□□□□ -0.36
Nkx3-1P97436 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx3-1P97436 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Gm5866-201ENSMUST00000177881 973 ntBASIC12.81□□□□□ -0.36
Nkx3-1P97436 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.81□□□□□ -0.36
Nkx3-1P97436 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-1P97436 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.8□□□□□ -0.36
Nkx3-1P97436 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.8□□□□□ -0.36
Nkx3-1P97436 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-1P97436 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nkx3-1P97436 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx3-1P97436 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-1P97436 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-1P97436 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nkx3-1P97436 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx3-1P97436 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-1P97436 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-1P97436 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx3-1P97436 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms