Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.04□□□□□ -0.16
Nup43P59235 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup43P59235 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.04□□□□□ -0.16
Nup43P59235 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Nup43P59235 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup43P59235 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nup43P59235 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nup43P59235 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup43P59235 Gm15427-201ENSMUST00000117288 531 ntBASIC14.03□□□□□ -0.16
Nup43P59235 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.03□□□□□ -0.16
Nup43P59235 Gm16026-204ENSMUST00000162652 683 ntBASIC14.03□□□□□ -0.16
Nup43P59235 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.03□□□□□ -0.16
Nup43P59235 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nup43P59235 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nup43P59235 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup43P59235 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Nup43P59235 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup43P59235 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup43P59235 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.02□□□□□ -0.16
Nup43P59235 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nup43P59235 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nup43P59235 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Nup43P59235 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup43P59235 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup43P59235 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup43P59235 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup43P59235 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup43P59235 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nup43P59235 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.02□□□□□ -0.17
Nup43P59235 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Nup43P59235 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.02□□□□□ -0.17
Nup43P59235 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.02□□□□□ -0.17
Nup43P59235 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.02□□□□□ -0.17
Nup43P59235 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.02□□□□□ -0.17
Nup43P59235 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.02□□□□□ -0.17
Nup43P59235 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup43P59235 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup43P59235 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup43P59235 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup43P59235 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup43P59235 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup43P59235 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup43P59235 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup43P59235 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup43P59235 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup43P59235 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup43P59235 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nup43P59235 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.01□□□□□ -0.17
Nup43P59235 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.01□□□□□ -0.17
Nup43P59235 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nup43P59235 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.01□□□□□ -0.17
Nup43P59235 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup43P59235 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Nup43P59235 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nup43P59235 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup43P59235 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup43P59235 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nup43P59235 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14□□□□□ -0.17
Nup43P59235 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14□□□□□ -0.17
Nup43P59235 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms