Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Prox1P48437 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prox1P48437 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.29□□□□□ -0.12
Prox1P48437 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.29□□□□□ -0.12
Prox1P48437 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.29□□□□□ -0.12
Prox1P48437 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.29□□□□□ -0.12
Prox1P48437 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Prox1P48437 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Prox1P48437 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prox1P48437 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prox1P48437 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Prox1P48437 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.29□□□□□ -0.12
Prox1P48437 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prox1P48437 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.28□□□□□ -0.12
Prox1P48437 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.28□□□□□ -0.12
Prox1P48437 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.28□□□□□ -0.12
Prox1P48437 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Prox1P48437 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Prox1P48437 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prox1P48437 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prox1P48437 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prox1P48437 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prox1P48437 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Prox1P48437 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prox1P48437 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prox1P48437 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Prox1P48437 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prox1P48437 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.27□□□□□ -0.12
Prox1P48437 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prox1P48437 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prox1P48437 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prox1P48437 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prox1P48437 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Prox1P48437 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.27□□□□□ -0.13
Prox1P48437 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Prox1P48437 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Prox1P48437 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prox1P48437 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Prox1P48437 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prox1P48437 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms