Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh4P39038 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cdh4P39038 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh4P39038 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh4P39038 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh4P39038 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh4P39038 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh4P39038 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Cdh4P39038 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh4P39038 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cdh4P39038 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Cdh4P39038 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh4P39038 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.21□□□□□ -0.13
Cdh4P39038 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh4P39038 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.21□□□□□ -0.13
Cdh4P39038 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.21□□□□□ -0.13
Cdh4P39038 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.21□□□□□ -0.13
Cdh4P39038 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.21□□□□□ -0.13
Cdh4P39038 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh4P39038 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.21□□□□□ -0.13
Cdh4P39038 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh4P39038 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh4P39038 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdh4P39038 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh4P39038 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh4P39038 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.21□□□□□ -0.14
Cdh4P39038 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cdh4P39038 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh4P39038 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh4P39038 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cdh4P39038 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cdh4P39038 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh4P39038 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
Cdh4P39038 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cdh4P39038 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cdh4P39038 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh4P39038 Gm4995-201ENSMUST00000117247 432 ntBASIC14.2□□□□□ -0.14
Cdh4P39038 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
Cdh4P39038 Gm25911-201ENSMUST00000157621 56 ntBASIC14.2□□□□□ -0.14
Cdh4P39038 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.2□□□□□ -0.14
Cdh4P39038 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh4P39038 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.2□□□□□ -0.14
Cdh4P39038 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh4P39038 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh4P39038 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.2□□□□□ -0.14
Cdh4P39038 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cdh4P39038 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh4P39038 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.19□□□□□ -0.14
Cdh4P39038 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdh4P39038 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdh4P39038 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.19□□□□□ -0.14
Cdh4P39038 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Gm27397-201ENSMUST00000184997 107 ntBASIC14.19□□□□□ -0.14
Cdh4P39038 Gm2756-201ENSMUST00000195851 400 ntBASIC14.19□□□□□ -0.14
Cdh4P39038 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.19□□□□□ -0.14
Cdh4P39038 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.19□□□□□ -0.14
Cdh4P39038 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cdh4P39038 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.19□□□□□ -0.14
Cdh4P39038 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Cdh4P39038 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh4P39038 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms