Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Gm18049-201ENSMUST00000208909 581 ntBASIC15.1■□□□□ 0.01
Rc3h2P0C090 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h2P0C090 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h2P0C090 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Rc3h2P0C090 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h2P0C090 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h2P0C090 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h2P0C090 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rc3h2P0C090 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Rc3h2P0C090 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h2P0C090 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h2P0C090 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h2P0C090 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h2P0C090 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h2P0C090 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.09■□□□□ 0.01
Rc3h2P0C090 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Gm29541-201ENSMUST00000191351 678 ntBASIC15.09■□□□□ 0.01
Rc3h2P0C090 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.09■□□□□ 0.01
Rc3h2P0C090 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h2P0C090 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Rc3h2P0C090 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rc3h2P0C090 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rc3h2P0C090 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rc3h2P0C090 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rc3h2P0C090 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.08■□□□□ 0
Rc3h2P0C090 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.08■□□□□ 0
Rc3h2P0C090 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.08■□□□□ 0
Rc3h2P0C090 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.08■□□□□ 0
Rc3h2P0C090 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.08■□□□□ 0
Rc3h2P0C090 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.08■□□□□ 0
Rc3h2P0C090 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rc3h2P0C090 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h2P0C090 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rc3h2P0C090 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Rc3h2P0C090 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h2P0C090 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms