Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.03□□□□□ -0.48
P04940 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
P04940 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.03□□□□□ -0.48
P04940 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.03□□□□□ -0.48
P04940 Gm5364-201ENSMUST00000216789 889 ntBASIC12.03□□□□□ -0.48
P04940 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
P04940 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.03□□□□□ -0.48
P04940 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
P04940 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
P04940 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.03□□□□□ -0.48
P04940 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04940 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04940 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04940 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
P04940 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
P04940 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04940 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
P04940 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
P04940 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
P04940 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.02□□□□□ -0.49
P04940 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.02□□□□□ -0.49
P04940 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.02□□□□□ -0.49
P04940 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
P04940 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.02□□□□□ -0.49
P04940 Gm2451-201ENSMUST00000199447 999 ntBASIC12.02□□□□□ -0.49
P04940 Gm10290-201ENSMUST00000200451 999 ntBASIC12.02□□□□□ -0.49
P04940 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.02□□□□□ -0.49
P04940 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.02□□□□□ -0.49
P04940 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
P04940 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.02□□□□□ -0.49
P04940 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.02□□□□□ -0.49
P04940 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.02□□□□□ -0.49
P04940 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.02□□□□□ -0.49
P04940 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P04940 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.02□□□□□ -0.49
P04940 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.01□□□□□ -0.49
P04940 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
P04940 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
P04940 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.01□□□□□ -0.49
P04940 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
P04940 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Mir8117-201ENSMUST00000184773 107 ntBASIC12.01□□□□□ -0.49
P04940 Olfr286-202ENSMUST00000205305 969 ntBASIC12.01□□□□□ -0.49
P04940 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.01□□□□□ -0.49
P04940 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.01□□□□□ -0.49
P04940 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04940 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms