Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CopeO89079 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CopeO89079 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.35■□□□□ 0.05
CopeO89079 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CopeO89079 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CopeO89079 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.35■□□□□ 0.05
CopeO89079 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.35■□□□□ 0.05
CopeO89079 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CopeO89079 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CopeO89079 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CopeO89079 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CopeO89079 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CopeO89079 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CopeO89079 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
CopeO89079 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CopeO89079 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CopeO89079 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CopeO89079 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CopeO89079 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CopeO89079 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CopeO89079 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
CopeO89079 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CopeO89079 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CopeO89079 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CopeO89079 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CopeO89079 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
CopeO89079 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CopeO89079 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CopeO89079 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CopeO89079 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CopeO89079 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.33■□□□□ 0.04
CopeO89079 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CopeO89079 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.33■□□□□ 0.04
CopeO89079 Gm27646-201ENSMUST00000183989 110 ntBASIC15.33■□□□□ 0.04
CopeO89079 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.33■□□□□ 0.04
CopeO89079 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CopeO89079 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CopeO89079 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CopeO89079 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CopeO89079 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CopeO89079 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CopeO89079 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CopeO89079 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CopeO89079 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CopeO89079 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CopeO89079 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CopeO89079 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CopeO89079 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CopeO89079 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CopeO89079 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CopeO89079 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.32■□□□□ 0.04
CopeO89079 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.32■□□□□ 0.04
CopeO89079 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CopeO89079 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Gm12644-201ENSMUST00000119935 606 ntBASIC15.32■□□□□ 0.04
CopeO89079 Gm12895-201ENSMUST00000122214 226 ntBASIC15.32■□□□□ 0.04
CopeO89079 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.32■□□□□ 0.04
CopeO89079 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.32■□□□□ 0.04
CopeO89079 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Gm6296-201ENSMUST00000222599 943 ntBASIC15.32■□□□□ 0.04
CopeO89079 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.32■□□□□ 0.04
CopeO89079 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CopeO89079 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CopeO89079 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CopeO89079 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms