Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Hdac3O88895 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.32□□□□□ -0.28
Hdac3O88895 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.32□□□□□ -0.28
Hdac3O88895 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hdac3O88895 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.32□□□□□ -0.28
Hdac3O88895 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.32□□□□□ -0.28
Hdac3O88895 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Gm7222-201ENSMUST00000117512 906 ntBASIC13.32□□□□□ -0.28
Hdac3O88895 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Hdac3O88895 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hdac3O88895 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.32□□□□□ -0.28
Hdac3O88895 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.32□□□□□ -0.28
Hdac3O88895 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.32□□□□□ -0.28
Hdac3O88895 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.32□□□□□ -0.28
Hdac3O88895 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.32□□□□□ -0.28
Hdac3O88895 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdac3O88895 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Hdac3O88895 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.31□□□□□ -0.28
Hdac3O88895 Gm18489-201ENSMUST00000172565 551 ntBASIC13.31□□□□□ -0.28
Hdac3O88895 Gm18195-201ENSMUST00000207604 706 ntBASIC13.31□□□□□ -0.28
Hdac3O88895 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.31□□□□□ -0.28
Hdac3O88895 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Hdac3O88895 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hdac3O88895 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.31□□□□□ -0.28
Hdac3O88895 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Hdac3O88895 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hdac3O88895 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hdac3O88895 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.3□□□□□ -0.28
Hdac3O88895 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Hdac3O88895 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hdac3O88895 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms