Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.24□□□□□ -0.13
Best1O88870 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Best1O88870 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Best1O88870 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.24□□□□□ -0.13
Best1O88870 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Best1O88870 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.24□□□□□ -0.13
Best1O88870 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.24□□□□□ -0.13
Best1O88870 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.24□□□□□ -0.13
Best1O88870 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.24□□□□□ -0.13
Best1O88870 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Best1O88870 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Best1O88870 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.24□□□□□ -0.13
Best1O88870 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Best1O88870 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.23□□□□□ -0.13
Best1O88870 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Gm13823-201ENSMUST00000119930 345 ntBASIC14.23□□□□□ -0.13
Best1O88870 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.23□□□□□ -0.13
Best1O88870 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.23□□□□□ -0.13
Best1O88870 Mir7023-201ENSMUST00000185093 64 ntBASIC14.23□□□□□ -0.13
Best1O88870 Gm28630-201ENSMUST00000187806 498 ntBASIC14.23□□□□□ -0.13
Best1O88870 Gm37230-201ENSMUST00000194491 818 ntBASIC14.23□□□□□ -0.13
Best1O88870 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Best1O88870 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Best1O88870 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.23□□□□□ -0.13
Best1O88870 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.23□□□□□ -0.13
Best1O88870 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Best1O88870 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Best1O88870 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.23□□□□□ -0.13
Best1O88870 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Best1O88870 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Best1O88870 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.22□□□□□ -0.13
Best1O88870 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Gm5566-201ENSMUST00000116118 459 ntBASIC14.22□□□□□ -0.13
Best1O88870 Gm8410-201ENSMUST00000117225 605 ntBASIC14.22□□□□□ -0.13
Best1O88870 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.22□□□□□ -0.13
Best1O88870 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Best1O88870 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Best1O88870 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.21□□□□□ -0.13
Best1O88870 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Best1O88870 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Best1O88870 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Best1O88870 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Best1O88870 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms