Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trdmt1O55055 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.28■□□□□ 0.2
Trdmt1O55055 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdmt1O55055 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trdmt1O55055 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trdmt1O55055 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.28■□□□□ 0.2
Trdmt1O55055 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdmt1O55055 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.28■□□□□ 0.2
Trdmt1O55055 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trdmt1O55055 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trdmt1O55055 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.28■□□□□ 0.2
Trdmt1O55055 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.28■□□□□ 0.2
Trdmt1O55055 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.28■□□□□ 0.2
Trdmt1O55055 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.28■□□□□ 0.2
Trdmt1O55055 Gm9182-201ENSMUST00000217829 639 ntBASIC16.28■□□□□ 0.2
Trdmt1O55055 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Trdmt1O55055 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trdmt1O55055 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdmt1O55055 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdmt1O55055 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdmt1O55055 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trdmt1O55055 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdmt1O55055 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdmt1O55055 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trdmt1O55055 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trdmt1O55055 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trdmt1O55055 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trdmt1O55055 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trdmt1O55055 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trdmt1O55055 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trdmt1O55055 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trdmt1O55055 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Trdmt1O55055 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trdmt1O55055 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trdmt1O55055 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trdmt1O55055 Gm22189-201ENSMUST00000103822 86 ntBASIC16.27■□□□□ 0.2
Trdmt1O55055 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trdmt1O55055 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trdmt1O55055 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trdmt1O55055 Gm28631-201ENSMUST00000190740 334 ntBASIC16.27■□□□□ 0.2
Trdmt1O55055 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.27■□□□□ 0.2
Trdmt1O55055 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trdmt1O55055 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trdmt1O55055 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trdmt1O55055 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trdmt1O55055 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trdmt1O55055 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trdmt1O55055 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trdmt1O55055 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trdmt1O55055 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Trdmt1O55055 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trdmt1O55055 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.26■□□□□ 0.19
Trdmt1O55055 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trdmt1O55055 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trdmt1O55055 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.26■□□□□ 0.19
Trdmt1O55055 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.26■□□□□ 0.19
Trdmt1O55055 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdmt1O55055 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdmt1O55055 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdmt1O55055 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.25■□□□□ 0.19
Trdmt1O55055 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdmt1O55055 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdmt1O55055 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trdmt1O55055 Gm14042-201ENSMUST00000120139 833 ntBASIC16.25■□□□□ 0.19
Trdmt1O55055 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdmt1O55055 Gm9726-201ENSMUST00000180321 678 ntBASIC16.25■□□□□ 0.19
Trdmt1O55055 Gm9522-201ENSMUST00000182394 926 ntBASIC16.25■□□□□ 0.19
Trdmt1O55055 Gm42612-201ENSMUST00000197986 623 ntBASIC16.25■□□□□ 0.19
Trdmt1O55055 Gm43170-201ENSMUST00000199827 612 ntBASIC16.25■□□□□ 0.19
Trdmt1O55055 Gm9229-201ENSMUST00000222777 126 ntBASIC16.25■□□□□ 0.19
Trdmt1O55055 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trdmt1O55055 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdmt1O55055 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trdmt1O55055 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trdmt1O55055 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.25■□□□□ 0.19
Trdmt1O55055 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Trdmt1O55055 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdmt1O55055 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdmt1O55055 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdmt1O55055 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdmt1O55055 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.24■□□□□ 0.19
Trdmt1O55055 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms