Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.46□□□□□ -0.41
Ccr6O54689 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccr6O54689 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Ccr6O54689 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccr6O54689 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.46□□□□□ -0.42
Ccr6O54689 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Ccr6O54689 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.42
Ccr6O54689 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.46□□□□□ -0.42
Ccr6O54689 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccr6O54689 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccr6O54689 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccr6O54689 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Ccr6O54689 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.45□□□□□ -0.42
Ccr6O54689 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.45□□□□□ -0.42
Ccr6O54689 Gm8344-201ENSMUST00000119813 856 ntBASIC12.45□□□□□ -0.42
Ccr6O54689 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Ccr6O54689 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.45□□□□□ -0.42
Ccr6O54689 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Ccr6O54689 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccr6O54689 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccr6O54689 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.45□□□□□ -0.42
Ccr6O54689 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccr6O54689 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccr6O54689 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccr6O54689 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccr6O54689 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Ccr6O54689 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.44□□□□□ -0.42
Ccr6O54689 Grk6-207ENSMUST00000225925 2769 ntBASIC12.44□□□□□ -0.42
Ccr6O54689 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccr6O54689 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.44□□□□□ -0.42
Ccr6O54689 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.44□□□□□ -0.42
Ccr6O54689 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccr6O54689 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.44□□□□□ -0.42
Ccr6O54689 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccr6O54689 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.44□□□□□ -0.42
Ccr6O54689 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccr6O54689 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.44□□□□□ -0.42
Ccr6O54689 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccr6O54689 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccr6O54689 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccr6O54689 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms