Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.28■□□□□ 0.04
Trove2O08848 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.28■□□□□ 0.04
Trove2O08848 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trove2O08848 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trove2O08848 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.28■□□□□ 0.04
Trove2O08848 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.28■□□□□ 0.04
Trove2O08848 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.28■□□□□ 0.04
Trove2O08848 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.28■□□□□ 0.04
Trove2O08848 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.28■□□□□ 0.04
Trove2O08848 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.28■□□□□ 0.04
Trove2O08848 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trove2O08848 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trove2O08848 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trove2O08848 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trove2O08848 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trove2O08848 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Trove2O08848 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trove2O08848 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trove2O08848 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trove2O08848 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trove2O08848 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trove2O08848 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.27■□□□□ 0.04
Trove2O08848 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trove2O08848 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trove2O08848 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trove2O08848 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.27■□□□□ 0.04
Trove2O08848 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trove2O08848 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trove2O08848 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trove2O08848 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trove2O08848 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trove2O08848 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trove2O08848 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trove2O08848 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trove2O08848 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trove2O08848 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trove2O08848 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trove2O08848 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trove2O08848 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trove2O08848 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trove2O08848 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trove2O08848 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.27■□□□□ 0.03
Trove2O08848 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.26■□□□□ 0.03
Trove2O08848 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trove2O08848 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trove2O08848 Gm15372-201ENSMUST00000120729 834 ntBASIC15.26■□□□□ 0.03
Trove2O08848 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Trove2O08848 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trove2O08848 Gm25745-201ENSMUST00000174945 133 ntBASIC15.26■□□□□ 0.03
Trove2O08848 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.26■□□□□ 0.03
Trove2O08848 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Trove2O08848 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.26■□□□□ 0.03
Trove2O08848 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trove2O08848 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trove2O08848 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trove2O08848 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trove2O08848 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trove2O08848 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trove2O08848 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trove2O08848 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trove2O08848 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trove2O08848 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trove2O08848 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trove2O08848 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trove2O08848 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.25■□□□□ 0.03
Trove2O08848 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms