Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.36■□□□□ 0.37
Tcof1O08784 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.36■□□□□ 0.37
Tcof1O08784 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tcof1O08784 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Tcof1O08784 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tcof1O08784 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tcof1O08784 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Gm13616-201ENSMUST00000120600 222 ntBASIC17.35■□□□□ 0.37
Tcof1O08784 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.35■□□□□ 0.37
Tcof1O08784 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.35■□□□□ 0.37
Tcof1O08784 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Tcof1O08784 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.35■□□□□ 0.37
Tcof1O08784 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.35■□□□□ 0.37
Tcof1O08784 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Tcof1O08784 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.35■□□□□ 0.37
Tcof1O08784 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.35■□□□□ 0.37
Tcof1O08784 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tcof1O08784 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Tcof1O08784 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.34■□□□□ 0.37
Tcof1O08784 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Tcof1O08784 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Tcof1O08784 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.34■□□□□ 0.37
Tcof1O08784 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.34■□□□□ 0.37
Tcof1O08784 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Tcof1O08784 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.34■□□□□ 0.37
Tcof1O08784 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Tcof1O08784 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tcof1O08784 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.34■□□□□ 0.37
Tcof1O08784 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tcof1O08784 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.34■□□□□ 0.37
Tcof1O08784 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.34■□□□□ 0.37
Tcof1O08784 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tcof1O08784 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tcof1O08784 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tcof1O08784 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tcof1O08784 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tcof1O08784 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tcof1O08784 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tcof1O08784 Sybu-209ENSMUST00000228639 4113 ntBASIC17.33■□□□□ 0.36
Tcof1O08784 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tcof1O08784 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.33■□□□□ 0.36
Tcof1O08784 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.33■□□□□ 0.36
Tcof1O08784 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tcof1O08784 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Tcof1O08784 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tcof1O08784 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.33■□□□□ 0.36
Tcof1O08784 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
Tcof1O08784 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.33■□□□□ 0.36
Tcof1O08784 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.33■□□□□ 0.36
Tcof1O08784 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tcof1O08784 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tcof1O08784 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tcof1O08784 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms