Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2jO08740 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.27□□□□□ -0.13
Polr2jO08740 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.26□□□□□ -0.13
Polr2jO08740 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Polr2jO08740 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.26□□□□□ -0.13
Polr2jO08740 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.26□□□□□ -0.13
Polr2jO08740 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.26□□□□□ -0.13
Polr2jO08740 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2jO08740 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.26□□□□□ -0.13
Polr2jO08740 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.26□□□□□ -0.13
Polr2jO08740 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Polr2jO08740 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.25□□□□□ -0.13
Polr2jO08740 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.25□□□□□ -0.13
Polr2jO08740 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.25□□□□□ -0.13
Polr2jO08740 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.25□□□□□ -0.13
Polr2jO08740 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.25□□□□□ -0.13
Polr2jO08740 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.25□□□□□ -0.13
Polr2jO08740 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Polr2jO08740 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Polr2jO08740 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2jO08740 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.24□□□□□ -0.13
Polr2jO08740 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.24□□□□□ -0.13
Polr2jO08740 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Polr2jO08740 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.24□□□□□ -0.13
Polr2jO08740 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.24□□□□□ -0.13
Polr2jO08740 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.24□□□□□ -0.13
Polr2jO08740 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Polr2jO08740 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.24□□□□□ -0.13
Polr2jO08740 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Polr2jO08740 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Polr2jO08740 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Polr2jO08740 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Polr2jO08740 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Polr2jO08740 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Polr2jO08740 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Polr2jO08740 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Polr2jO08740 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Polr2jO08740 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Polr2jO08740 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Polr2jO08740 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.23□□□□□ -0.13
Polr2jO08740 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Polr2jO08740 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Polr2jO08740 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.23□□□□□ -0.13
Polr2jO08740 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Polr2jO08740 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Polr2jO08740 Gm18489-201ENSMUST00000172565 551 ntBASIC14.23□□□□□ -0.13
Polr2jO08740 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.23□□□□□ -0.13
Polr2jO08740 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Polr2jO08740 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms