Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Gm6916-202ENSMUST00000205523 195 ntBASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
B020004C17RikJ3QP07 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Gm15393-201ENSMUST00000120499 219 ntBASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Gm15806-201ENSMUST00000120696 955 ntBASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Gm33320-201ENSMUST00000192232 530 ntBASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Gm44719-201ENSMUST00000206404 149 ntBASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Gm18062-201ENSMUST00000208020 547 ntBASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Gm18055-201ENSMUST00000208254 547 ntBASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
B020004C17RikJ3QP07 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
B020004C17RikJ3QP07 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Gm10275-202ENSMUST00000168697 495 ntBASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Gm10275-201ENSMUST00000092620 635 ntBASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
B020004C17RikJ3QP07 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
B020004C17RikJ3QP07 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms