Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hfm1D3Z4R1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Gm15240-201ENSMUST00000118156 720 ntBASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Gm42693-201ENSMUST00000196779 631 ntBASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Mir1247-201ENSMUST00000116706 82 ntBASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Gm6283-201ENSMUST00000182369 1000 ntBASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Gm37424-201ENSMUST00000191727 561 ntBASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 AC155258.1-201ENSMUST00000219303 253 ntBASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Gm10478-201ENSMUST00000084451 396 ntBASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hfm1D3Z4R1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Hfm1D3Z4R1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hfm1D3Z4R1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Hfm1D3Z4R1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC20.52■□□□□ 0.87
Hfm1D3Z4R1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Hfm1D3Z4R1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Hfm1D3Z4R1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hfm1D3Z4R1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hfm1D3Z4R1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Gm4804-201ENSMUST00000182234 999 ntBASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms