Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm4899-201ENSMUST00000178708 719 ntBASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm7461-201ENSMUST00000058918 827 ntBASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm45133-201ENSMUST00000207548 2773 ntBASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm13036-201ENSMUST00000117799 748 ntBASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm43935-201ENSMUST00000203569 1050 ntBASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm18246-201ENSMUST00000221023 728 ntBASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms