Protein–RNA interactions for Protein: A0A075B6B3

Trav6d-3, T cell receptor alpha variable 6D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-3A0A075B6B3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm28033-201ENSMUST00000184224 96 ntBASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Birc2-201ENSMUST00000054878 378 ntBASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-3A0A075B6B3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Rps4l-201ENSMUST00000071745 943 ntBASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-3A0A075B6B3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm7230-201ENSMUST00000173026 815 ntBASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Gm27459-201ENSMUST00000184860 107 ntBASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6d-3A0A075B6B3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms