Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm20760-201ENSMUST00000179197 648 ntBASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav7n-4A0A075B620 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Gm37722-201ENSMUST00000193757 208 ntBASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.24□□□□□ -0.61
Trav7n-4A0A075B620 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms