Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PdfS4R2K0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdfS4R2K0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdfS4R2K0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdfS4R2K0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdfS4R2K0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PdfS4R2K0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.93■□□□□ 0.3
PdfS4R2K0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PdfS4R2K0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PdfS4R2K0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PdfS4R2K0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PdfS4R2K0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PdfS4R2K0 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.92■□□□□ 0.3
PdfS4R2K0 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.92■□□□□ 0.3
PdfS4R2K0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PdfS4R2K0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdfS4R2K0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.91■□□□□ 0.3
PdfS4R2K0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
PdfS4R2K0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PdfS4R2K0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdfS4R2K0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdfS4R2K0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdfS4R2K0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdfS4R2K0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdfS4R2K0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdfS4R2K0 Gm6821-201ENSMUST00000107540 542 ntBASIC16.9■□□□□ 0.3
PdfS4R2K0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PdfS4R2K0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PdfS4R2K0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PdfS4R2K0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PdfS4R2K0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PdfS4R2K0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PdfS4R2K0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PdfS4R2K0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PdfS4R2K0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PdfS4R2K0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.88■□□□□ 0.29
PdfS4R2K0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PdfS4R2K0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PdfS4R2K0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PdfS4R2K0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PdfS4R2K0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PdfS4R2K0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PdfS4R2K0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PdfS4R2K0 Particl-201ENSMUST00000205370 1560 ntBASIC16.87■□□□□ 0.29
PdfS4R2K0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PdfS4R2K0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PdfS4R2K0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PdfS4R2K0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PdfS4R2K0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
PdfS4R2K0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PdfS4R2K0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PdfS4R2K0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PdfS4R2K0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PdfS4R2K0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PdfS4R2K0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PdfS4R2K0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PdfS4R2K0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.86■□□□□ 0.29
PdfS4R2K0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PdfS4R2K0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PdfS4R2K0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PdfS4R2K0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PdfS4R2K0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PdfS4R2K0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PdfS4R2K0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PdfS4R2K0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PdfS4R2K0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PdfS4R2K0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PdfS4R2K0 Nkain2-201ENSMUST00000092602 558 ntBASIC16.84■□□□□ 0.29
PdfS4R2K0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdfS4R2K0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdfS4R2K0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PdfS4R2K0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PdfS4R2K0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdfS4R2K0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
PdfS4R2K0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
PdfS4R2K0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PdfS4R2K0 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.83■□□□□ 0.28
PdfS4R2K0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PdfS4R2K0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
PdfS4R2K0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PdfS4R2K0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PdfS4R2K0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdfS4R2K0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.82■□□□□ 0.28
PdfS4R2K0 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.82■□□□□ 0.28
PdfS4R2K0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PdfS4R2K0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdfS4R2K0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PdfS4R2K0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PdfS4R2K0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PdfS4R2K0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdfS4R2K0 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.81■□□□□ 0.28
PdfS4R2K0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PdfS4R2K0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdfS4R2K0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdfS4R2K0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdfS4R2K0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PdfS4R2K0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PdfS4R2K0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdfS4R2K0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdfS4R2K0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms