Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn6Q9Z262 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.89■□□□□ 0.94
Cldn6Q9Z262 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cldn6Q9Z262 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn6Q9Z262 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn6Q9Z262 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn6Q9Z262 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn6Q9Z262 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn6Q9Z262 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.88■□□□□ 0.93
Cldn6Q9Z262 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn6Q9Z262 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn6Q9Z262 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn6Q9Z262 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn6Q9Z262 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn6Q9Z262 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cldn6Q9Z262 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.87■□□□□ 0.93
Cldn6Q9Z262 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn6Q9Z262 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn6Q9Z262 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn6Q9Z262 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn6Q9Z262 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn6Q9Z262 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cldn6Q9Z262 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cldn6Q9Z262 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn6Q9Z262 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn6Q9Z262 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cldn6Q9Z262 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn6Q9Z262 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn6Q9Z262 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Cldn6Q9Z262 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Cldn6Q9Z262 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.84■□□□□ 0.93
Cldn6Q9Z262 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn6Q9Z262 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn6Q9Z262 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.84■□□□□ 0.93
Cldn6Q9Z262 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.83■□□□□ 0.93
Cldn6Q9Z262 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn6Q9Z262 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn6Q9Z262 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Cldn6Q9Z262 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cldn6Q9Z262 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cldn6Q9Z262 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn6Q9Z262 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.82■□□□□ 0.92
Cldn6Q9Z262 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn6Q9Z262 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn6Q9Z262 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn6Q9Z262 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cldn6Q9Z262 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn6Q9Z262 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn6Q9Z262 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn6Q9Z262 Scarna2-201ENSMUST00000157560 414 ntBASIC20.81■□□□□ 0.92
Cldn6Q9Z262 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn6Q9Z262 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.81■□□□□ 0.92
Cldn6Q9Z262 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn6Q9Z262 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn6Q9Z262 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.8■□□□□ 0.92
Cldn6Q9Z262 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn6Q9Z262 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn6Q9Z262 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn6Q9Z262 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cldn6Q9Z262 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cldn6Q9Z262 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Cldn6Q9Z262 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Cldn6Q9Z262 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.78■□□□□ 0.92
Cldn6Q9Z262 Gm9806-201ENSMUST00000051080 552 ntBASIC20.78■□□□□ 0.92
Cldn6Q9Z262 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.78■□□□□ 0.92
Cldn6Q9Z262 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn6Q9Z262 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn6Q9Z262 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.77■□□□□ 0.92
Cldn6Q9Z262 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn6Q9Z262 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn6Q9Z262 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn6Q9Z262 Gm16437-201ENSMUST00000025669 507 ntBASIC20.77■□□□□ 0.92
Cldn6Q9Z262 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn6Q9Z262 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cldn6Q9Z262 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn6Q9Z262 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.76■□□□□ 0.91
Cldn6Q9Z262 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.76■□□□□ 0.91
Cldn6Q9Z262 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cldn6Q9Z262 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn6Q9Z262 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn6Q9Z262 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cldn6Q9Z262 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn6Q9Z262 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.75■□□□□ 0.91
Cldn6Q9Z262 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn6Q9Z262 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn6Q9Z262 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.75■□□□□ 0.91
Cldn6Q9Z262 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn6Q9Z262 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn6Q9Z262 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cldn6Q9Z262 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn6Q9Z262 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn6Q9Z262 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn6Q9Z262 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn6Q9Z262 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cldn6Q9Z262 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn6Q9Z262 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.74■□□□□ 0.91
Cldn6Q9Z262 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn6Q9Z262 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cldn6Q9Z262 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn6Q9Z262 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms