Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cx3cr1Q9Z0D9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.88■□□□□ 0.61
Cx3cr1Q9Z0D9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cr1Q9Z0D9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cx3cr1Q9Z0D9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cr1Q9Z0D9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cr1Q9Z0D9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cr1Q9Z0D9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Cx3cr1Q9Z0D9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cx3cr1Q9Z0D9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cx3cr1Q9Z0D9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cx3cr1Q9Z0D9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cx3cr1Q9Z0D9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cx3cr1Q9Z0D9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cx3cr1Q9Z0D9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cx3cr1Q9Z0D9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cx3cr1Q9Z0D9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.85■□□□□ 0.61
Cx3cr1Q9Z0D9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cx3cr1Q9Z0D9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cx3cr1Q9Z0D9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.85■□□□□ 0.61
Cx3cr1Q9Z0D9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cx3cr1Q9Z0D9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cx3cr1Q9Z0D9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cx3cr1Q9Z0D9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Cx3cr1Q9Z0D9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.84■□□□□ 0.61
Cx3cr1Q9Z0D9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cx3cr1Q9Z0D9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.84■□□□□ 0.61
Cx3cr1Q9Z0D9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cx3cr1Q9Z0D9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cx3cr1Q9Z0D9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cx3cr1Q9Z0D9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cx3cr1Q9Z0D9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cx3cr1Q9Z0D9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Cx3cr1Q9Z0D9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cx3cr1Q9Z0D9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cx3cr1Q9Z0D9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.82■□□□□ 0.6
Cx3cr1Q9Z0D9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.81■□□□□ 0.6
Cx3cr1Q9Z0D9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.81■□□□□ 0.6
Cx3cr1Q9Z0D9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cx3cr1Q9Z0D9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cx3cr1Q9Z0D9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.81■□□□□ 0.6
Cx3cr1Q9Z0D9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cx3cr1Q9Z0D9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cx3cr1Q9Z0D9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cx3cr1Q9Z0D9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cx3cr1Q9Z0D9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cx3cr1Q9Z0D9 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.8■□□□□ 0.6
Cx3cr1Q9Z0D9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Cx3cr1Q9Z0D9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cx3cr1Q9Z0D9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cx3cr1Q9Z0D9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Cx3cr1Q9Z0D9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cx3cr1Q9Z0D9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cx3cr1Q9Z0D9 Gm37136-201ENSMUST00000194368 194 ntBASIC18.79■□□□□ 0.6
Cx3cr1Q9Z0D9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cx3cr1Q9Z0D9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cx3cr1Q9Z0D9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cx3cr1Q9Z0D9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cx3cr1Q9Z0D9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cx3cr1Q9Z0D9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cx3cr1Q9Z0D9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cx3cr1Q9Z0D9 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.77■□□□□ 0.6
Cx3cr1Q9Z0D9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.76■□□□□ 0.59
Cx3cr1Q9Z0D9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cr1Q9Z0D9 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.76■□□□□ 0.59
Cx3cr1Q9Z0D9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cr1Q9Z0D9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.76■□□□□ 0.59
Cx3cr1Q9Z0D9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cr1Q9Z0D9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.76■□□□□ 0.59
Cx3cr1Q9Z0D9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cr1Q9Z0D9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cx3cr1Q9Z0D9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cx3cr1Q9Z0D9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cx3cr1Q9Z0D9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cx3cr1Q9Z0D9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cx3cr1Q9Z0D9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cx3cr1Q9Z0D9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.74■□□□□ 0.59
Cx3cr1Q9Z0D9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Cx3cr1Q9Z0D9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cx3cr1Q9Z0D9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cx3cr1Q9Z0D9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cx3cr1Q9Z0D9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cx3cr1Q9Z0D9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cx3cr1Q9Z0D9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cx3cr1Q9Z0D9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cx3cr1Q9Z0D9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cx3cr1Q9Z0D9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cx3cr1Q9Z0D9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cx3cr1Q9Z0D9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.73■□□□□ 0.59
Cx3cr1Q9Z0D9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cx3cr1Q9Z0D9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cx3cr1Q9Z0D9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cx3cr1Q9Z0D9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cx3cr1Q9Z0D9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cx3cr1Q9Z0D9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cx3cr1Q9Z0D9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cx3cr1Q9Z0D9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cx3cr1Q9Z0D9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cx3cr1Q9Z0D9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cx3cr1Q9Z0D9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms