Protein–RNA interactions for Protein: Q9QZE2

Clnk, Cytokine-dependent hematopoietic cell linker, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClnkQ9QZE2 Gm5786-201ENSMUST00000085368 882 ntBASIC20.61■□□□□ 0.89
ClnkQ9QZE2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClnkQ9QZE2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClnkQ9QZE2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ClnkQ9QZE2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.6■□□□□ 0.89
ClnkQ9QZE2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ClnkQ9QZE2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.59■□□□□ 0.89
ClnkQ9QZE2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ClnkQ9QZE2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ClnkQ9QZE2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ClnkQ9QZE2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ClnkQ9QZE2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ClnkQ9QZE2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ClnkQ9QZE2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ClnkQ9QZE2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ClnkQ9QZE2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ClnkQ9QZE2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ClnkQ9QZE2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
ClnkQ9QZE2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ClnkQ9QZE2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ClnkQ9QZE2 Cap2-205ENSMUST00000225824 1634 ntBASIC20.58■□□□□ 0.89
ClnkQ9QZE2 Gm14523-201ENSMUST00000117260 558 ntBASIC20.58■□□□□ 0.89
ClnkQ9QZE2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ClnkQ9QZE2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ClnkQ9QZE2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ClnkQ9QZE2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ClnkQ9QZE2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ClnkQ9QZE2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ClnkQ9QZE2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ClnkQ9QZE2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.57■□□□□ 0.88
ClnkQ9QZE2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClnkQ9QZE2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClnkQ9QZE2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClnkQ9QZE2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClnkQ9QZE2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.56■□□□□ 0.88
ClnkQ9QZE2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ClnkQ9QZE2 Gm7332-201ENSMUST00000118351 454 ntBASIC20.56■□□□□ 0.88
ClnkQ9QZE2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.56■□□□□ 0.88
ClnkQ9QZE2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ClnkQ9QZE2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ClnkQ9QZE2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ClnkQ9QZE2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ClnkQ9QZE2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ClnkQ9QZE2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ClnkQ9QZE2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ClnkQ9QZE2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.54■□□□□ 0.88
ClnkQ9QZE2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.54■□□□□ 0.88
ClnkQ9QZE2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ClnkQ9QZE2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ClnkQ9QZE2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ClnkQ9QZE2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.54■□□□□ 0.88
ClnkQ9QZE2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ClnkQ9QZE2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ClnkQ9QZE2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClnkQ9QZE2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.53■□□□□ 0.88
ClnkQ9QZE2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClnkQ9QZE2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClnkQ9QZE2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.52■□□□□ 0.88
ClnkQ9QZE2 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.52■□□□□ 0.88
ClnkQ9QZE2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.52■□□□□ 0.88
ClnkQ9QZE2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
ClnkQ9QZE2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ClnkQ9QZE2 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.51■□□□□ 0.87
ClnkQ9QZE2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ClnkQ9QZE2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ClnkQ9QZE2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.51■□□□□ 0.87
ClnkQ9QZE2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ClnkQ9QZE2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ClnkQ9QZE2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ClnkQ9QZE2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ClnkQ9QZE2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ClnkQ9QZE2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.5■□□□□ 0.87
ClnkQ9QZE2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ClnkQ9QZE2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.5■□□□□ 0.87
ClnkQ9QZE2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ClnkQ9QZE2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ClnkQ9QZE2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClnkQ9QZE2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ClnkQ9QZE2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClnkQ9QZE2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClnkQ9QZE2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ClnkQ9QZE2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClnkQ9QZE2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ClnkQ9QZE2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ClnkQ9QZE2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ClnkQ9QZE2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ClnkQ9QZE2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ClnkQ9QZE2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ClnkQ9QZE2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.46■□□□□ 0.87
ClnkQ9QZE2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ClnkQ9QZE2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.46■□□□□ 0.87
ClnkQ9QZE2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ClnkQ9QZE2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ClnkQ9QZE2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ClnkQ9QZE2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ClnkQ9QZE2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ClnkQ9QZE2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ClnkQ9QZE2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ClnkQ9QZE2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ClnkQ9QZE2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms