Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Scn5aQ9JJV9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
Scn5aQ9JJV9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scn5aQ9JJV9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.63■■□□□ 1.37
Scn5aQ9JJV9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Scn5aQ9JJV9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scn5aQ9JJV9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Scn5aQ9JJV9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.62■■□□□ 1.37
Scn5aQ9JJV9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scn5aQ9JJV9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scn5aQ9JJV9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.62■■□□□ 1.37
Scn5aQ9JJV9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scn5aQ9JJV9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scn5aQ9JJV9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Scn5aQ9JJV9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Scn5aQ9JJV9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Scn5aQ9JJV9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
Scn5aQ9JJV9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.6■■□□□ 1.37
Scn5aQ9JJV9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.6■■□□□ 1.37
Scn5aQ9JJV9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Scn5aQ9JJV9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Scn5aQ9JJV9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Scn5aQ9JJV9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scn5aQ9JJV9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Scn5aQ9JJV9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.59■■□□□ 1.37
Scn5aQ9JJV9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scn5aQ9JJV9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Scn5aQ9JJV9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.59■■□□□ 1.37
Scn5aQ9JJV9 Gm9959-201ENSMUST00000068277 390 ntBASIC23.59■■□□□ 1.37
Scn5aQ9JJV9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Scn5aQ9JJV9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Scn5aQ9JJV9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Scn5aQ9JJV9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Scn5aQ9JJV9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Scn5aQ9JJV9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
Scn5aQ9JJV9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Scn5aQ9JJV9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Scn5aQ9JJV9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Scn5aQ9JJV9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Scn5aQ9JJV9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Scn5aQ9JJV9 Gm45102-201ENSMUST00000207427 857 ntBASIC23.57■■□□□ 1.36
Scn5aQ9JJV9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Scn5aQ9JJV9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Scn5aQ9JJV9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.56■■□□□ 1.36
Scn5aQ9JJV9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Scn5aQ9JJV9 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.56■■□□□ 1.36
Scn5aQ9JJV9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Scn5aQ9JJV9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.55■■□□□ 1.36
Scn5aQ9JJV9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.55■■□□□ 1.36
Scn5aQ9JJV9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.55■■□□□ 1.36
Scn5aQ9JJV9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.54■■□□□ 1.36
Scn5aQ9JJV9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Scn5aQ9JJV9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Scn5aQ9JJV9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.53■■□□□ 1.36
Scn5aQ9JJV9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Scn5aQ9JJV9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Scn5aQ9JJV9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Scn5aQ9JJV9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Scn5aQ9JJV9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Scn5aQ9JJV9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Scn5aQ9JJV9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Scn5aQ9JJV9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Scn5aQ9JJV9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Scn5aQ9JJV9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Scn5aQ9JJV9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.51■■□□□ 1.35
Scn5aQ9JJV9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Scn5aQ9JJV9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.51■■□□□ 1.35
Scn5aQ9JJV9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Scn5aQ9JJV9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Scn5aQ9JJV9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Scn5aQ9JJV9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Scn5aQ9JJV9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Scn5aQ9JJV9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Scn5aQ9JJV9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.49■■□□□ 1.35
Scn5aQ9JJV9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Scn5aQ9JJV9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Scn5aQ9JJV9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Scn5aQ9JJV9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Scn5aQ9JJV9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.47■■□□□ 1.35
Scn5aQ9JJV9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Scn5aQ9JJV9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.47■■□□□ 1.35
Scn5aQ9JJV9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.47■■□□□ 1.35
Scn5aQ9JJV9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Scn5aQ9JJV9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Scn5aQ9JJV9 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.47■■□□□ 1.35
Scn5aQ9JJV9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Scn5aQ9JJV9 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.46■■□□□ 1.35
Scn5aQ9JJV9 Gm10232-201ENSMUST00000089221 720 ntBASIC23.46■■□□□ 1.35
Scn5aQ9JJV9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Scn5aQ9JJV9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Scn5aQ9JJV9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Scn5aQ9JJV9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Scn5aQ9JJV9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Scn5aQ9JJV9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Scn5aQ9JJV9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Scn5aQ9JJV9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Scn5aQ9JJV9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Scn5aQ9JJV9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Scn5aQ9JJV9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Scn5aQ9JJV9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms