Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rcl1Q9JJT0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rcl1Q9JJT0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rcl1Q9JJT0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rcl1Q9JJT0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rcl1Q9JJT0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rcl1Q9JJT0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rcl1Q9JJT0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rcl1Q9JJT0 Gm11599-201ENSMUST00000118720 878 ntBASIC18.69■□□□□ 0.58
Rcl1Q9JJT0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
Rcl1Q9JJT0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.69■□□□□ 0.58
Rcl1Q9JJT0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rcl1Q9JJT0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rcl1Q9JJT0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Rcl1Q9JJT0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rcl1Q9JJT0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rcl1Q9JJT0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rcl1Q9JJT0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rcl1Q9JJT0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.68■□□□□ 0.58
Rcl1Q9JJT0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rcl1Q9JJT0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.67■□□□□ 0.58
Rcl1Q9JJT0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rcl1Q9JJT0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.67■□□□□ 0.58
Rcl1Q9JJT0 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.67■□□□□ 0.58
Rcl1Q9JJT0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rcl1Q9JJT0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rcl1Q9JJT0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rcl1Q9JJT0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.66■□□□□ 0.58
Rcl1Q9JJT0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rcl1Q9JJT0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rcl1Q9JJT0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rcl1Q9JJT0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rcl1Q9JJT0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rcl1Q9JJT0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rcl1Q9JJT0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rcl1Q9JJT0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rcl1Q9JJT0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.64■□□□□ 0.57
Rcl1Q9JJT0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.64■□□□□ 0.57
Rcl1Q9JJT0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rcl1Q9JJT0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rcl1Q9JJT0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rcl1Q9JJT0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rcl1Q9JJT0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rcl1Q9JJT0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rcl1Q9JJT0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rcl1Q9JJT0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rcl1Q9JJT0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rcl1Q9JJT0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rcl1Q9JJT0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.62■□□□□ 0.57
Rcl1Q9JJT0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rcl1Q9JJT0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rcl1Q9JJT0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rcl1Q9JJT0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rcl1Q9JJT0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rcl1Q9JJT0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rcl1Q9JJT0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rcl1Q9JJT0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rcl1Q9JJT0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rcl1Q9JJT0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rcl1Q9JJT0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rcl1Q9JJT0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rcl1Q9JJT0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rcl1Q9JJT0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rcl1Q9JJT0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rcl1Q9JJT0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rcl1Q9JJT0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rcl1Q9JJT0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rcl1Q9JJT0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rcl1Q9JJT0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rcl1Q9JJT0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rcl1Q9JJT0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rcl1Q9JJT0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rcl1Q9JJT0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.58■□□□□ 0.57
Rcl1Q9JJT0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rcl1Q9JJT0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rcl1Q9JJT0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rcl1Q9JJT0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rcl1Q9JJT0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rcl1Q9JJT0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rcl1Q9JJT0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rcl1Q9JJT0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rcl1Q9JJT0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rcl1Q9JJT0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rcl1Q9JJT0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rcl1Q9JJT0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rcl1Q9JJT0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rcl1Q9JJT0 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.55■□□□□ 0.56
Rcl1Q9JJT0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rcl1Q9JJT0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rcl1Q9JJT0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rcl1Q9JJT0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rcl1Q9JJT0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rcl1Q9JJT0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rcl1Q9JJT0 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.54■□□□□ 0.56
Rcl1Q9JJT0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rcl1Q9JJT0 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.53■□□□□ 0.56
Rcl1Q9JJT0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rcl1Q9JJT0 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.53■□□□□ 0.56
Rcl1Q9JJT0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rcl1Q9JJT0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms