Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ube4bQ9ES00 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4bQ9ES00 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.36■■□□□ 1.01
Ube4bQ9ES00 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4bQ9ES00 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4bQ9ES00 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube4bQ9ES00 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.35■■□□□ 1.01
Ube4bQ9ES00 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Ube4bQ9ES00 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
Ube4bQ9ES00 Gm9397-201ENSMUST00000200125 605 ntBASIC21.34■■□□□ 1.01
Ube4bQ9ES00 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ube4bQ9ES00 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ube4bQ9ES00 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ube4bQ9ES00 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ube4bQ9ES00 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Ube4bQ9ES00 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.33■■□□□ 1
Ube4bQ9ES00 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Ube4bQ9ES00 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Ube4bQ9ES00 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ube4bQ9ES00 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ube4bQ9ES00 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.32■■□□□ 1
Ube4bQ9ES00 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ube4bQ9ES00 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ube4bQ9ES00 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ube4bQ9ES00 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.32■■□□□ 1
Ube4bQ9ES00 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ube4bQ9ES00 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ube4bQ9ES00 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ube4bQ9ES00 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ube4bQ9ES00 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ube4bQ9ES00 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ube4bQ9ES00 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ube4bQ9ES00 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ube4bQ9ES00 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.3■■□□□ 1
Ube4bQ9ES00 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ube4bQ9ES00 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ube4bQ9ES00 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ube4bQ9ES00 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Ube4bQ9ES00 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ube4bQ9ES00 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ube4bQ9ES00 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.28■■□□□ 1
Ube4bQ9ES00 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ube4bQ9ES00 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ube4bQ9ES00 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ube4bQ9ES00 Gm24970-201ENSMUST00000175582 82 ntBASIC21.28■■□□□ 1
Ube4bQ9ES00 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ube4bQ9ES00 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ube4bQ9ES00 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ube4bQ9ES00 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ube4bQ9ES00 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ube4bQ9ES00 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ube4bQ9ES00 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ube4bQ9ES00 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ube4bQ9ES00 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.27■■□□□ 1
Ube4bQ9ES00 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.27■■□□□ 1
Ube4bQ9ES00 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.27■■□□□ 1
Ube4bQ9ES00 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Ube4bQ9ES00 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ube4bQ9ES00 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ube4bQ9ES00 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.26■□□□□ 0.99
Ube4bQ9ES00 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.26■□□□□ 0.99
Ube4bQ9ES00 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ube4bQ9ES00 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ube4bQ9ES00 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube4bQ9ES00 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube4bQ9ES00 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Ube4bQ9ES00 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.25■□□□□ 0.99
Ube4bQ9ES00 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube4bQ9ES00 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube4bQ9ES00 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ube4bQ9ES00 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube4bQ9ES00 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4bQ9ES00 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4bQ9ES00 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ube4bQ9ES00 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ube4bQ9ES00 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4bQ9ES00 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4bQ9ES00 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4bQ9ES00 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4bQ9ES00 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.22■□□□□ 0.99
Ube4bQ9ES00 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4bQ9ES00 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.22■□□□□ 0.99
Ube4bQ9ES00 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4bQ9ES00 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4bQ9ES00 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4bQ9ES00 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4bQ9ES00 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube4bQ9ES00 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube4bQ9ES00 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube4bQ9ES00 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube4bQ9ES00 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Ube4bQ9ES00 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4bQ9ES00 Gm45855-201ENSMUST00000212546 880 ntBASIC21.2■□□□□ 0.98
Ube4bQ9ES00 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ube4bQ9ES00 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Ube4bQ9ES00 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4bQ9ES00 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4bQ9ES00 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4bQ9ES00 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4bQ9ES00 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms