Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssmem1Q9D9Y8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssmem1Q9D9Y8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ssmem1Q9D9Y8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.27■□□□□ 0.68
Ssmem1Q9D9Y8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssmem1Q9D9Y8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssmem1Q9D9Y8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssmem1Q9D9Y8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.26■□□□□ 0.67
Ssmem1Q9D9Y8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssmem1Q9D9Y8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssmem1Q9D9Y8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ssmem1Q9D9Y8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssmem1Q9D9Y8 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.25■□□□□ 0.67
Ssmem1Q9D9Y8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssmem1Q9D9Y8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Ssmem1Q9D9Y8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ssmem1Q9D9Y8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssmem1Q9D9Y8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssmem1Q9D9Y8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.24■□□□□ 0.67
Ssmem1Q9D9Y8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.24■□□□□ 0.67
Ssmem1Q9D9Y8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ssmem1Q9D9Y8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.24■□□□□ 0.67
Ssmem1Q9D9Y8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.24■□□□□ 0.67
Ssmem1Q9D9Y8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssmem1Q9D9Y8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.23■□□□□ 0.67
Ssmem1Q9D9Y8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssmem1Q9D9Y8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssmem1Q9D9Y8 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.23■□□□□ 0.67
Ssmem1Q9D9Y8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssmem1Q9D9Y8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ssmem1Q9D9Y8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssmem1Q9D9Y8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssmem1Q9D9Y8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssmem1Q9D9Y8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssmem1Q9D9Y8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.22■□□□□ 0.67
Ssmem1Q9D9Y8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssmem1Q9D9Y8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssmem1Q9D9Y8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssmem1Q9D9Y8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssmem1Q9D9Y8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssmem1Q9D9Y8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssmem1Q9D9Y8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssmem1Q9D9Y8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssmem1Q9D9Y8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ssmem1Q9D9Y8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssmem1Q9D9Y8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ssmem1Q9D9Y8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssmem1Q9D9Y8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ssmem1Q9D9Y8 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.2■□□□□ 0.66
Ssmem1Q9D9Y8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssmem1Q9D9Y8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssmem1Q9D9Y8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssmem1Q9D9Y8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ssmem1Q9D9Y8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssmem1Q9D9Y8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ssmem1Q9D9Y8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssmem1Q9D9Y8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssmem1Q9D9Y8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssmem1Q9D9Y8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssmem1Q9D9Y8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssmem1Q9D9Y8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssmem1Q9D9Y8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssmem1Q9D9Y8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssmem1Q9D9Y8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ssmem1Q9D9Y8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.16■□□□□ 0.66
Ssmem1Q9D9Y8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ssmem1Q9D9Y8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ssmem1Q9D9Y8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssmem1Q9D9Y8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ssmem1Q9D9Y8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssmem1Q9D9Y8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ssmem1Q9D9Y8 Gm10420-201ENSMUST00000121713 882 ntBASIC19.15■□□□□ 0.66
Ssmem1Q9D9Y8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssmem1Q9D9Y8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ssmem1Q9D9Y8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.14■□□□□ 0.66
Ssmem1Q9D9Y8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssmem1Q9D9Y8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssmem1Q9D9Y8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssmem1Q9D9Y8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssmem1Q9D9Y8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssmem1Q9D9Y8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssmem1Q9D9Y8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssmem1Q9D9Y8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ssmem1Q9D9Y8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssmem1Q9D9Y8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssmem1Q9D9Y8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssmem1Q9D9Y8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.12■□□□□ 0.65
Ssmem1Q9D9Y8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssmem1Q9D9Y8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssmem1Q9D9Y8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssmem1Q9D9Y8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssmem1Q9D9Y8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ssmem1Q9D9Y8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ssmem1Q9D9Y8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.11■□□□□ 0.65
Ssmem1Q9D9Y8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssmem1Q9D9Y8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssmem1Q9D9Y8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Ssmem1Q9D9Y8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssmem1Q9D9Y8 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.1■□□□□ 0.65
Ssmem1Q9D9Y8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms