Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.84■■□□□ 1.09
Rsph9Q9D9V4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rsph9Q9D9V4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rsph9Q9D9V4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rsph9Q9D9V4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rsph9Q9D9V4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rsph9Q9D9V4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rsph9Q9D9V4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Rsph9Q9D9V4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rsph9Q9D9V4 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.82■■□□□ 1.08
Rsph9Q9D9V4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rsph9Q9D9V4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rsph9Q9D9V4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rsph9Q9D9V4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rsph9Q9D9V4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rsph9Q9D9V4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rsph9Q9D9V4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rsph9Q9D9V4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rsph9Q9D9V4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph9Q9D9V4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph9Q9D9V4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph9Q9D9V4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph9Q9D9V4 Gm5921-201ENSMUST00000075898 882 ntBASIC21.8■■□□□ 1.08
Rsph9Q9D9V4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rsph9Q9D9V4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rsph9Q9D9V4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.79■■□□□ 1.08
Rsph9Q9D9V4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.79■■□□□ 1.08
Rsph9Q9D9V4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.78■■□□□ 1.08
Rsph9Q9D9V4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph9Q9D9V4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph9Q9D9V4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph9Q9D9V4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rsph9Q9D9V4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rsph9Q9D9V4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rsph9Q9D9V4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rsph9Q9D9V4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Rsph9Q9D9V4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rsph9Q9D9V4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Rsph9Q9D9V4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Rsph9Q9D9V4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Rsph9Q9D9V4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rsph9Q9D9V4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rsph9Q9D9V4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rsph9Q9D9V4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rsph9Q9D9V4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rsph9Q9D9V4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rsph9Q9D9V4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rsph9Q9D9V4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rsph9Q9D9V4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Rsph9Q9D9V4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Rsph9Q9D9V4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
Rsph9Q9D9V4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rsph9Q9D9V4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rsph9Q9D9V4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rsph9Q9D9V4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rsph9Q9D9V4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rsph9Q9D9V4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rsph9Q9D9V4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rsph9Q9D9V4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rsph9Q9D9V4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rsph9Q9D9V4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rsph9Q9D9V4 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.71■■□□□ 1.07
Rsph9Q9D9V4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rsph9Q9D9V4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rsph9Q9D9V4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rsph9Q9D9V4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rsph9Q9D9V4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.7■■□□□ 1.06
Rsph9Q9D9V4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rsph9Q9D9V4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rsph9Q9D9V4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Rsph9Q9D9V4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rsph9Q9D9V4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rsph9Q9D9V4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rsph9Q9D9V4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rsph9Q9D9V4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.69■■□□□ 1.06
Rsph9Q9D9V4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rsph9Q9D9V4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph9Q9D9V4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph9Q9D9V4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph9Q9D9V4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph9Q9D9V4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph9Q9D9V4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rsph9Q9D9V4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rsph9Q9D9V4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rsph9Q9D9V4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rsph9Q9D9V4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.66■■□□□ 1.06
Rsph9Q9D9V4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph9Q9D9V4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph9Q9D9V4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.65■■□□□ 1.06
Rsph9Q9D9V4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph9Q9D9V4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph9Q9D9V4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Rsph9Q9D9V4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph9Q9D9V4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.64■■□□□ 1.06
Rsph9Q9D9V4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.64■■□□□ 1.06
Rsph9Q9D9V4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rsph9Q9D9V4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rsph9Q9D9V4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rsph9Q9D9V4 Gm5812-201ENSMUST00000061073 957 ntBASIC21.64■■□□□ 1.05
Rsph9Q9D9V4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms