Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Snrnp48Q9D361 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Snrnp48Q9D361 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Snrnp48Q9D361 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Snrnp48Q9D361 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Snrnp48Q9D361 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Snrnp48Q9D361 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.26■■□□□ 1.15
Snrnp48Q9D361 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Snrnp48Q9D361 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Snrnp48Q9D361 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Snrnp48Q9D361 Gm11687-201ENSMUST00000118911 886 ntBASIC22.25■■□□□ 1.15
Snrnp48Q9D361 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.25■■□□□ 1.15
Snrnp48Q9D361 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Snrnp48Q9D361 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Snrnp48Q9D361 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Snrnp48Q9D361 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
Snrnp48Q9D361 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Snrnp48Q9D361 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Snrnp48Q9D361 Gm16437-201ENSMUST00000025669 507 ntBASIC22.23■■□□□ 1.15
Snrnp48Q9D361 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.22■■□□□ 1.15
Snrnp48Q9D361 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Snrnp48Q9D361 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Snrnp48Q9D361 Gm44428-201ENSMUST00000204474 874 ntBASIC22.22■■□□□ 1.15
Snrnp48Q9D361 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Snrnp48Q9D361 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Snrnp48Q9D361 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Snrnp48Q9D361 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Snrnp48Q9D361 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Snrnp48Q9D361 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.2■■□□□ 1.15
Snrnp48Q9D361 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.2■■□□□ 1.14
Snrnp48Q9D361 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Snrnp48Q9D361 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.2■■□□□ 1.14
Snrnp48Q9D361 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Snrnp48Q9D361 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.19■■□□□ 1.14
Snrnp48Q9D361 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Snrnp48Q9D361 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Snrnp48Q9D361 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Snrnp48Q9D361 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Snrnp48Q9D361 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.17■■□□□ 1.14
Snrnp48Q9D361 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Snrnp48Q9D361 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Snrnp48Q9D361 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Snrnp48Q9D361 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Snrnp48Q9D361 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Snrnp48Q9D361 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.16■■□□□ 1.14
Snrnp48Q9D361 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.16■■□□□ 1.14
Snrnp48Q9D361 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Snrnp48Q9D361 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Snrnp48Q9D361 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Snrnp48Q9D361 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Snrnp48Q9D361 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Snrnp48Q9D361 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Snrnp48Q9D361 Gm11175-201ENSMUST00000116172 543 ntBASIC22.13■■□□□ 1.13
Snrnp48Q9D361 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Snrnp48Q9D361 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.12■■□□□ 1.13
Snrnp48Q9D361 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.12■■□□□ 1.13
Snrnp48Q9D361 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Snrnp48Q9D361 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Snrnp48Q9D361 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Snrnp48Q9D361 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Snrnp48Q9D361 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Snrnp48Q9D361 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Snrnp48Q9D361 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Snrnp48Q9D361 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Snrnp48Q9D361 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Snrnp48Q9D361 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.1■■□□□ 1.13
Snrnp48Q9D361 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Snrnp48Q9D361 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Snrnp48Q9D361 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Snrnp48Q9D361 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Snrnp48Q9D361 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Snrnp48Q9D361 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Snrnp48Q9D361 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.09■■□□□ 1.13
Snrnp48Q9D361 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Snrnp48Q9D361 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Snrnp48Q9D361 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.09■■□□□ 1.13
Snrnp48Q9D361 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Snrnp48Q9D361 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Snrnp48Q9D361 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Snrnp48Q9D361 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Snrnp48Q9D361 Mir6538-201ENSMUST00000183713 110 ntBASIC22.08■■□□□ 1.13
Snrnp48Q9D361 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Snrnp48Q9D361 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Snrnp48Q9D361 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Snrnp48Q9D361 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Snrnp48Q9D361 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Snrnp48Q9D361 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Snrnp48Q9D361 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Snrnp48Q9D361 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Snrnp48Q9D361 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.06■■□□□ 1.12
Snrnp48Q9D361 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.06■■□□□ 1.12
Snrnp48Q9D361 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
Snrnp48Q9D361 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Snrnp48Q9D361 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Snrnp48Q9D361 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Snrnp48Q9D361 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
Snrnp48Q9D361 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Snrnp48Q9D361 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Snrnp48Q9D361 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Snrnp48Q9D361 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms