Protein–RNA interactions for Protein: Q9CZ04

Cops7a, COP9 signalosome complex subunit 7a, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops7aQ9CZ04 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cops7aQ9CZ04 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cops7aQ9CZ04 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Cops7aQ9CZ04 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cops7aQ9CZ04 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cops7aQ9CZ04 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.42■■□□□ 1.02
Cops7aQ9CZ04 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Cops7aQ9CZ04 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cops7aQ9CZ04 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.42■■□□□ 1.02
Cops7aQ9CZ04 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cops7aQ9CZ04 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.42■■□□□ 1.02
Cops7aQ9CZ04 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cops7aQ9CZ04 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cops7aQ9CZ04 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.41■■□□□ 1.02
Cops7aQ9CZ04 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.41■■□□□ 1.02
Cops7aQ9CZ04 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cops7aQ9CZ04 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Cops7aQ9CZ04 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cops7aQ9CZ04 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Cops7aQ9CZ04 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
Cops7aQ9CZ04 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.4■■□□□ 1.02
Cops7aQ9CZ04 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cops7aQ9CZ04 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cops7aQ9CZ04 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.39■■□□□ 1.02
Cops7aQ9CZ04 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cops7aQ9CZ04 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Cops7aQ9CZ04 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.39■■□□□ 1.01
Cops7aQ9CZ04 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.39■■□□□ 1.01
Cops7aQ9CZ04 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cops7aQ9CZ04 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cops7aQ9CZ04 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cops7aQ9CZ04 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.38■■□□□ 1.01
Cops7aQ9CZ04 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cops7aQ9CZ04 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cops7aQ9CZ04 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cops7aQ9CZ04 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cops7aQ9CZ04 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Cops7aQ9CZ04 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Cops7aQ9CZ04 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cops7aQ9CZ04 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cops7aQ9CZ04 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cops7aQ9CZ04 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.36■■□□□ 1.01
Cops7aQ9CZ04 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cops7aQ9CZ04 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cops7aQ9CZ04 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cops7aQ9CZ04 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cops7aQ9CZ04 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cops7aQ9CZ04 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cops7aQ9CZ04 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cops7aQ9CZ04 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cops7aQ9CZ04 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cops7aQ9CZ04 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cops7aQ9CZ04 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cops7aQ9CZ04 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cops7aQ9CZ04 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Cops7aQ9CZ04 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cops7aQ9CZ04 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cops7aQ9CZ04 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cops7aQ9CZ04 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cops7aQ9CZ04 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cops7aQ9CZ04 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cops7aQ9CZ04 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cops7aQ9CZ04 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.33■■□□□ 1.01
Cops7aQ9CZ04 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cops7aQ9CZ04 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.32■■□□□ 1
Cops7aQ9CZ04 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cops7aQ9CZ04 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cops7aQ9CZ04 Gm10420-201ENSMUST00000121713 882 ntBASIC21.31■■□□□ 1
Cops7aQ9CZ04 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cops7aQ9CZ04 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cops7aQ9CZ04 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cops7aQ9CZ04 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cops7aQ9CZ04 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cops7aQ9CZ04 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Cops7aQ9CZ04 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Cops7aQ9CZ04 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cops7aQ9CZ04 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cops7aQ9CZ04 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cops7aQ9CZ04 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cops7aQ9CZ04 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cops7aQ9CZ04 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cops7aQ9CZ04 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cops7aQ9CZ04 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.28■■□□□ 1
Cops7aQ9CZ04 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cops7aQ9CZ04 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cops7aQ9CZ04 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.28■■□□□ 1
Cops7aQ9CZ04 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cops7aQ9CZ04 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cops7aQ9CZ04 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.27■■□□□ 1
Cops7aQ9CZ04 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cops7aQ9CZ04 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Cops7aQ9CZ04 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cops7aQ9CZ04 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cops7aQ9CZ04 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cops7aQ9CZ04 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.25■□□□□ 0.99
Cops7aQ9CZ04 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cops7aQ9CZ04 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cops7aQ9CZ04 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cops7aQ9CZ04 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cops7aQ9CZ04 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms