Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.3■■□□□ 1
Khdc3Q9CWU5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Khdc3Q9CWU5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Khdc3Q9CWU5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Khdc3Q9CWU5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Khdc3Q9CWU5 Terc-201ENSMUST00000082862 423 ntBASIC21.3■■□□□ 1
Khdc3Q9CWU5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Khdc3Q9CWU5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Khdc3Q9CWU5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Khdc3Q9CWU5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Khdc3Q9CWU5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.28■■□□□ 1
Khdc3Q9CWU5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Khdc3Q9CWU5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Khdc3Q9CWU5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Khdc3Q9CWU5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.27■■□□□ 1
Khdc3Q9CWU5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Khdc3Q9CWU5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.27■□□□□ 0.99
Khdc3Q9CWU5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Khdc3Q9CWU5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Khdc3Q9CWU5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Khdc3Q9CWU5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Khdc3Q9CWU5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Khdc3Q9CWU5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Khdc3Q9CWU5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Khdc3Q9CWU5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Khdc3Q9CWU5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Khdc3Q9CWU5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.25■□□□□ 0.99
Khdc3Q9CWU5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Khdc3Q9CWU5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Khdc3Q9CWU5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Khdc3Q9CWU5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.24■□□□□ 0.99
Khdc3Q9CWU5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Khdc3Q9CWU5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Khdc3Q9CWU5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Khdc3Q9CWU5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Khdc3Q9CWU5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.23■□□□□ 0.99
Khdc3Q9CWU5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Khdc3Q9CWU5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Khdc3Q9CWU5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Khdc3Q9CWU5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Khdc3Q9CWU5 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.22■□□□□ 0.99
Khdc3Q9CWU5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Khdc3Q9CWU5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Khdc3Q9CWU5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Khdc3Q9CWU5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.21■□□□□ 0.99
Khdc3Q9CWU5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Khdc3Q9CWU5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Khdc3Q9CWU5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Khdc3Q9CWU5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Khdc3Q9CWU5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Khdc3Q9CWU5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Khdc3Q9CWU5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Khdc3Q9CWU5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Khdc3Q9CWU5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Khdc3Q9CWU5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Khdc3Q9CWU5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Khdc3Q9CWU5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Khdc3Q9CWU5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.2■□□□□ 0.98
Khdc3Q9CWU5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Khdc3Q9CWU5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.2■□□□□ 0.98
Khdc3Q9CWU5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Khdc3Q9CWU5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.2■□□□□ 0.98
Khdc3Q9CWU5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Khdc3Q9CWU5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Khdc3Q9CWU5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Khdc3Q9CWU5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Khdc3Q9CWU5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Khdc3Q9CWU5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Khdc3Q9CWU5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Khdc3Q9CWU5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Khdc3Q9CWU5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Khdc3Q9CWU5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Khdc3Q9CWU5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.18■□□□□ 0.98
Khdc3Q9CWU5 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.18■□□□□ 0.98
Khdc3Q9CWU5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Khdc3Q9CWU5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Khdc3Q9CWU5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Khdc3Q9CWU5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Khdc3Q9CWU5 Scarna2-201ENSMUST00000157560 414 ntBASIC21.17■□□□□ 0.98
Khdc3Q9CWU5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.17■□□□□ 0.98
Khdc3Q9CWU5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Khdc3Q9CWU5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Khdc3Q9CWU5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Khdc3Q9CWU5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Khdc3Q9CWU5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Khdc3Q9CWU5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Khdc3Q9CWU5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Khdc3Q9CWU5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.16■□□□□ 0.98
Khdc3Q9CWU5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Khdc3Q9CWU5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Khdc3Q9CWU5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Khdc3Q9CWU5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
Khdc3Q9CWU5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Khdc3Q9CWU5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Khdc3Q9CWU5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.14■□□□□ 0.98
Khdc3Q9CWU5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Khdc3Q9CWU5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Khdc3Q9CWU5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.14■□□□□ 0.97
Khdc3Q9CWU5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Khdc3Q9CWU5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms