Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Retreg3Q9CQV4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Retreg3Q9CQV4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retreg3Q9CQV4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retreg3Q9CQV4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Retreg3Q9CQV4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.5■■□□□ 1.19
Retreg3Q9CQV4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retreg3Q9CQV4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retreg3Q9CQV4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retreg3Q9CQV4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retreg3Q9CQV4 Gm11687-201ENSMUST00000118911 886 ntBASIC22.49■■□□□ 1.19
Retreg3Q9CQV4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.49■■□□□ 1.19
Retreg3Q9CQV4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retreg3Q9CQV4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retreg3Q9CQV4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Retreg3Q9CQV4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.48■■□□□ 1.19
Retreg3Q9CQV4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.48■■□□□ 1.19
Retreg3Q9CQV4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retreg3Q9CQV4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.48■■□□□ 1.19
Retreg3Q9CQV4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retreg3Q9CQV4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retreg3Q9CQV4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retreg3Q9CQV4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.47■■□□□ 1.19
Retreg3Q9CQV4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retreg3Q9CQV4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retreg3Q9CQV4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Retreg3Q9CQV4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.47■■□□□ 1.19
Retreg3Q9CQV4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Retreg3Q9CQV4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retreg3Q9CQV4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retreg3Q9CQV4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retreg3Q9CQV4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retreg3Q9CQV4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retreg3Q9CQV4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retreg3Q9CQV4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retreg3Q9CQV4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Retreg3Q9CQV4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retreg3Q9CQV4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retreg3Q9CQV4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retreg3Q9CQV4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Retreg3Q9CQV4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.45■■□□□ 1.18
Retreg3Q9CQV4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retreg3Q9CQV4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Retreg3Q9CQV4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.44■■□□□ 1.18
Retreg3Q9CQV4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retreg3Q9CQV4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.43■■□□□ 1.18
Retreg3Q9CQV4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retreg3Q9CQV4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retreg3Q9CQV4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Retreg3Q9CQV4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retreg3Q9CQV4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Retreg3Q9CQV4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Retreg3Q9CQV4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.41■■□□□ 1.18
Retreg3Q9CQV4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retreg3Q9CQV4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retreg3Q9CQV4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Retreg3Q9CQV4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Retreg3Q9CQV4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Retreg3Q9CQV4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.39■■□□□ 1.17
Retreg3Q9CQV4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retreg3Q9CQV4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retreg3Q9CQV4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retreg3Q9CQV4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Retreg3Q9CQV4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.38■■□□□ 1.17
Retreg3Q9CQV4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Retreg3Q9CQV4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retreg3Q9CQV4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retreg3Q9CQV4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.38■■□□□ 1.17
Retreg3Q9CQV4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Retreg3Q9CQV4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.37■■□□□ 1.17
Retreg3Q9CQV4 Gm12366-201ENSMUST00000121722 873 ntBASIC22.37■■□□□ 1.17
Retreg3Q9CQV4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.37■■□□□ 1.17
Retreg3Q9CQV4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.37■■□□□ 1.17
Retreg3Q9CQV4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.37■■□□□ 1.17
Retreg3Q9CQV4 Gm5786-201ENSMUST00000085368 882 ntBASIC22.37■■□□□ 1.17
Retreg3Q9CQV4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retreg3Q9CQV4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retreg3Q9CQV4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
Retreg3Q9CQV4 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.36■■□□□ 1.17
Retreg3Q9CQV4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Retreg3Q9CQV4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Retreg3Q9CQV4 Gm27502-201ENSMUST00000183495 199 ntBASIC22.36■■□□□ 1.17
Retreg3Q9CQV4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retreg3Q9CQV4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Retreg3Q9CQV4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Retreg3Q9CQV4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retreg3Q9CQV4 Gm44428-201ENSMUST00000204474 874 ntBASIC22.34■■□□□ 1.17
Retreg3Q9CQV4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.34■■□□□ 1.17
Retreg3Q9CQV4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retreg3Q9CQV4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retreg3Q9CQV4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retreg3Q9CQV4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retreg3Q9CQV4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Retreg3Q9CQV4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Retreg3Q9CQV4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Retreg3Q9CQV4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retreg3Q9CQV4 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.32■■□□□ 1.16
Retreg3Q9CQV4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Retreg3Q9CQV4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.32■■□□□ 1.16
Retreg3Q9CQV4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms