Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha8Q91Y12 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha8Q91Y12 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha8Q91Y12 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdha8Q91Y12 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha8Q91Y12 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha8Q91Y12 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha8Q91Y12 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha8Q91Y12 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pcdha8Q91Y12 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Pcdha8Q91Y12 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha8Q91Y12 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha8Q91Y12 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.58■■□□□ 1.05
Pcdha8Q91Y12 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha8Q91Y12 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.58■■□□□ 1.04
Pcdha8Q91Y12 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha8Q91Y12 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha8Q91Y12 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha8Q91Y12 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha8Q91Y12 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha8Q91Y12 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha8Q91Y12 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pcdha8Q91Y12 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha8Q91Y12 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha8Q91Y12 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha8Q91Y12 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha8Q91Y12 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.56■■□□□ 1.04
Pcdha8Q91Y12 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha8Q91Y12 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha8Q91Y12 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdha8Q91Y12 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha8Q91Y12 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha8Q91Y12 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha8Q91Y12 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha8Q91Y12 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
Pcdha8Q91Y12 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha8Q91Y12 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha8Q91Y12 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.54■■□□□ 1.04
Pcdha8Q91Y12 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha8Q91Y12 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdha8Q91Y12 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha8Q91Y12 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.52■■□□□ 1.04
Pcdha8Q91Y12 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha8Q91Y12 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Pcdha8Q91Y12 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Pcdha8Q91Y12 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Pcdha8Q91Y12 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha8Q91Y12 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.51■■□□□ 1.03
Pcdha8Q91Y12 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha8Q91Y12 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha8Q91Y12 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha8Q91Y12 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha8Q91Y12 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha8Q91Y12 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha8Q91Y12 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha8Q91Y12 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha8Q91Y12 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha8Q91Y12 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha8Q91Y12 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdha8Q91Y12 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha8Q91Y12 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha8Q91Y12 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.49■■□□□ 1.03
Pcdha8Q91Y12 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Pcdha8Q91Y12 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha8Q91Y12 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha8Q91Y12 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Pcdha8Q91Y12 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Pcdha8Q91Y12 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha8Q91Y12 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Pcdha8Q91Y12 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdha8Q91Y12 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha8Q91Y12 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha8Q91Y12 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha8Q91Y12 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pcdha8Q91Y12 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha8Q91Y12 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha8Q91Y12 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdha8Q91Y12 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha8Q91Y12 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha8Q91Y12 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha8Q91Y12 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcdha8Q91Y12 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha8Q91Y12 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha8Q91Y12 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha8Q91Y12 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.46■■□□□ 1.03
Pcdha8Q91Y12 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms