Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb4Q91XZ6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.06■■□□□ 1.12
Pcdhb4Q91XZ6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb4Q91XZ6 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.06■■□□□ 1.12
Pcdhb4Q91XZ6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb4Q91XZ6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.06■■□□□ 1.12
Pcdhb4Q91XZ6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb4Q91XZ6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Pcdhb4Q91XZ6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb4Q91XZ6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb4Q91XZ6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb4Q91XZ6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb4Q91XZ6 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.05■■□□□ 1.12
Pcdhb4Q91XZ6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
Pcdhb4Q91XZ6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb4Q91XZ6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb4Q91XZ6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb4Q91XZ6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb4Q91XZ6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb4Q91XZ6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb4Q91XZ6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.03■■□□□ 1.12
Pcdhb4Q91XZ6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb4Q91XZ6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb4Q91XZ6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.02■■□□□ 1.12
Pcdhb4Q91XZ6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb4Q91XZ6 Gm11599-201ENSMUST00000118720 878 ntBASIC22.01■■□□□ 1.11
Pcdhb4Q91XZ6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb4Q91XZ6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Pcdhb4Q91XZ6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb4Q91XZ6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb4Q91XZ6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22■■□□□ 1.11
Pcdhb4Q91XZ6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb4Q91XZ6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb4Q91XZ6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb4Q91XZ6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb4Q91XZ6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22■■□□□ 1.11
Pcdhb4Q91XZ6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb4Q91XZ6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb4Q91XZ6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Pcdhb4Q91XZ6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb4Q91XZ6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Pcdhb4Q91XZ6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.99■■□□□ 1.11
Pcdhb4Q91XZ6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb4Q91XZ6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Pcdhb4Q91XZ6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Pcdhb4Q91XZ6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Pcdhb4Q91XZ6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb4Q91XZ6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb4Q91XZ6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Pcdhb4Q91XZ6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Pcdhb4Q91XZ6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb4Q91XZ6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb4Q91XZ6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb4Q91XZ6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Pcdhb4Q91XZ6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb4Q91XZ6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Pcdhb4Q91XZ6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
Pcdhb4Q91XZ6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Pcdhb4Q91XZ6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb4Q91XZ6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
Pcdhb4Q91XZ6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb4Q91XZ6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb4Q91XZ6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb4Q91XZ6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb4Q91XZ6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Pcdhb4Q91XZ6 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.94■■□□□ 1.1
Pcdhb4Q91XZ6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb4Q91XZ6 Mir3960-201ENSMUST00000198213 73 ntBASIC21.94■■□□□ 1.1
Pcdhb4Q91XZ6 Gm9812-201ENSMUST00000061934 968 ntBASIC21.94■■□□□ 1.1
Pcdhb4Q91XZ6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
Pcdhb4Q91XZ6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
Pcdhb4Q91XZ6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.94■■□□□ 1.1
Pcdhb4Q91XZ6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb4Q91XZ6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb4Q91XZ6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb4Q91XZ6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb4Q91XZ6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
Pcdhb4Q91XZ6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb4Q91XZ6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb4Q91XZ6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Pcdhb4Q91XZ6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb4Q91XZ6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb4Q91XZ6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
Pcdhb4Q91XZ6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb4Q91XZ6 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.9■■□□□ 1.1
Pcdhb4Q91XZ6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb4Q91XZ6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhb4Q91XZ6 Notumos-201ENSMUST00000151998 2659 ntBASIC21.89■■□□□ 1.1
Pcdhb4Q91XZ6 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.89■■□□□ 1.09
Pcdhb4Q91XZ6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb4Q91XZ6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb4Q91XZ6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb4Q91XZ6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb4Q91XZ6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb4Q91XZ6 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.88■■□□□ 1.09
Pcdhb4Q91XZ6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb4Q91XZ6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcdhb4Q91XZ6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb4Q91XZ6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb4Q91XZ6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms