Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdhga11Q91XY8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.36■■□□□ 1.01
Pcdhga11Q91XY8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga11Q91XY8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga11Q91XY8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga11Q91XY8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga11Q91XY8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga11Q91XY8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga11Q91XY8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga11Q91XY8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga11Q91XY8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga11Q91XY8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga11Q91XY8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga11Q91XY8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.33■■□□□ 1.01
Pcdhga11Q91XY8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga11Q91XY8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga11Q91XY8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.33■■□□□ 1.01
Pcdhga11Q91XY8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga11Q91XY8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhga11Q91XY8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.33■■□□□ 1
Pcdhga11Q91XY8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Pcdhga11Q91XY8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdhga11Q91XY8 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.32■■□□□ 1
Pcdhga11Q91XY8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga11Q91XY8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga11Q91XY8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.31■■□□□ 1
Pcdhga11Q91XY8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.31■■□□□ 1
Pcdhga11Q91XY8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.31■■□□□ 1
Pcdhga11Q91XY8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga11Q91XY8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.31■■□□□ 1
Pcdhga11Q91XY8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga11Q91XY8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga11Q91XY8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhga11Q91XY8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga11Q91XY8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdhga11Q91XY8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.29■■□□□ 1
Pcdhga11Q91XY8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga11Q91XY8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga11Q91XY8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga11Q91XY8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga11Q91XY8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Pcdhga11Q91XY8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcdhga11Q91XY8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga11Q91XY8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga11Q91XY8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhga11Q91XY8 Gm45364-201ENSMUST00000210883 159 ntBASIC21.28■■□□□ 1
Pcdhga11Q91XY8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga11Q91XY8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Pcdhga11Q91XY8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhga11Q91XY8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga11Q91XY8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
Pcdhga11Q91XY8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Pcdhga11Q91XY8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga11Q91XY8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga11Q91XY8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pcdhga11Q91XY8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga11Q91XY8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
Pcdhga11Q91XY8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhga11Q91XY8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga11Q91XY8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga11Q91XY8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.26■□□□□ 0.99
Pcdhga11Q91XY8 Terc-201ENSMUST00000082862 423 ntBASIC21.26■□□□□ 0.99
Pcdhga11Q91XY8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga11Q91XY8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga11Q91XY8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga11Q91XY8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga11Q91XY8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pcdhga11Q91XY8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.24■□□□□ 0.99
Pcdhga11Q91XY8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdhga11Q91XY8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pcdhga11Q91XY8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.24■□□□□ 0.99
Pcdhga11Q91XY8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhga11Q91XY8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga11Q91XY8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga11Q91XY8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.23■□□□□ 0.99
Pcdhga11Q91XY8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga11Q91XY8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdhga11Q91XY8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga11Q91XY8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga11Q91XY8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga11Q91XY8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Pcdhga11Q91XY8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga11Q91XY8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga11Q91XY8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdhga11Q91XY8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga11Q91XY8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga11Q91XY8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga11Q91XY8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga11Q91XY8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga11Q91XY8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga11Q91XY8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga11Q91XY8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga11Q91XY8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga11Q91XY8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga11Q91XY8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga11Q91XY8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga11Q91XY8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga11Q91XY8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga11Q91XY8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga11Q91XY8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms