Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga9Q91XX9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.06■■□□□ 1.12
Pcdhga9Q91XX9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga9Q91XX9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhga9Q91XX9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Pcdhga9Q91XX9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhga9Q91XX9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhga9Q91XX9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga9Q91XX9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga9Q91XX9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.04■■□□□ 1.12
Pcdhga9Q91XX9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga9Q91XX9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga9Q91XX9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga9Q91XX9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.03■■□□□ 1.12
Pcdhga9Q91XX9 Gm27502-201ENSMUST00000183495 199 ntBASIC22.03■■□□□ 1.12
Pcdhga9Q91XX9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga9Q91XX9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga9Q91XX9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga9Q91XX9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga9Q91XX9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga9Q91XX9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga9Q91XX9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga9Q91XX9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga9Q91XX9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga9Q91XX9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Pcdhga9Q91XX9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Pcdhga9Q91XX9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.01■■□□□ 1.11
Pcdhga9Q91XX9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga9Q91XX9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.01■■□□□ 1.11
Pcdhga9Q91XX9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga9Q91XX9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.01■■□□□ 1.11
Pcdhga9Q91XX9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Pcdhga9Q91XX9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga9Q91XX9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga9Q91XX9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga9Q91XX9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga9Q91XX9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga9Q91XX9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22■■□□□ 1.11
Pcdhga9Q91XX9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22■■□□□ 1.11
Pcdhga9Q91XX9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga9Q91XX9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga9Q91XX9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga9Q91XX9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga9Q91XX9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga9Q91XX9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga9Q91XX9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
Pcdhga9Q91XX9 Gm7332-201ENSMUST00000118351 454 ntBASIC21.99■■□□□ 1.11
Pcdhga9Q91XX9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga9Q91XX9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.99■■□□□ 1.11
Pcdhga9Q91XX9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhga9Q91XX9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhga9Q91XX9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhga9Q91XX9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhga9Q91XX9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Pcdhga9Q91XX9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga9Q91XX9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga9Q91XX9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga9Q91XX9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga9Q91XX9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga9Q91XX9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga9Q91XX9 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.97■■□□□ 1.11
Pcdhga9Q91XX9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga9Q91XX9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga9Q91XX9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga9Q91XX9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga9Q91XX9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga9Q91XX9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga9Q91XX9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga9Q91XX9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga9Q91XX9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
Pcdhga9Q91XX9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga9Q91XX9 Gm44428-201ENSMUST00000204474 874 ntBASIC21.94■■□□□ 1.1
Pcdhga9Q91XX9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga9Q91XX9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.94■■□□□ 1.1
Pcdhga9Q91XX9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.94■■□□□ 1.1
Pcdhga9Q91XX9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga9Q91XX9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga9Q91XX9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.93■■□□□ 1.1
Pcdhga9Q91XX9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga9Q91XX9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga9Q91XX9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Pcdhga9Q91XX9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga9Q91XX9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Pcdhga9Q91XX9 Gm14523-201ENSMUST00000117260 558 ntBASIC21.92■■□□□ 1.1
Pcdhga9Q91XX9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhga9Q91XX9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.92■■□□□ 1.1
Pcdhga9Q91XX9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.91■■□□□ 1.1
Pcdhga9Q91XX9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga9Q91XX9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga9Q91XX9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Pcdhga9Q91XX9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.91■■□□□ 1.1
Pcdhga9Q91XX9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Pcdhga9Q91XX9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga9Q91XX9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Pcdhga9Q91XX9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhga9Q91XX9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.89■■□□□ 1.09
Pcdhga9Q91XX9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhga9Q91XX9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga9Q91XX9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga9Q91XX9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms