Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Snrnp25Q8VIK1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Snrnp25Q8VIK1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Snrnp25Q8VIK1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Snrnp25Q8VIK1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Snrnp25Q8VIK1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Snrnp25Q8VIK1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Snrnp25Q8VIK1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.49■■□□□ 1.35
Snrnp25Q8VIK1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.49■■□□□ 1.35
Snrnp25Q8VIK1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Snrnp25Q8VIK1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Snrnp25Q8VIK1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Snrnp25Q8VIK1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
Snrnp25Q8VIK1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.48■■□□□ 1.35
Snrnp25Q8VIK1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Snrnp25Q8VIK1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.48■■□□□ 1.35
Snrnp25Q8VIK1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.48■■□□□ 1.35
Snrnp25Q8VIK1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Snrnp25Q8VIK1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Snrnp25Q8VIK1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Snrnp25Q8VIK1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Snrnp25Q8VIK1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.47■■□□□ 1.35
Snrnp25Q8VIK1 Gm12366-201ENSMUST00000121722 873 ntBASIC23.47■■□□□ 1.35
Snrnp25Q8VIK1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.47■■□□□ 1.35
Snrnp25Q8VIK1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Snrnp25Q8VIK1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.47■■□□□ 1.35
Snrnp25Q8VIK1 Gm5786-201ENSMUST00000085368 882 ntBASIC23.47■■□□□ 1.35
Snrnp25Q8VIK1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Snrnp25Q8VIK1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Snrnp25Q8VIK1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Snrnp25Q8VIK1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Snrnp25Q8VIK1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Snrnp25Q8VIK1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Snrnp25Q8VIK1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.45■■□□□ 1.34
Snrnp25Q8VIK1 Gm14523-201ENSMUST00000117260 558 ntBASIC23.45■■□□□ 1.34
Snrnp25Q8VIK1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Snrnp25Q8VIK1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Snrnp25Q8VIK1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Snrnp25Q8VIK1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Snrnp25Q8VIK1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.44■■□□□ 1.34
Snrnp25Q8VIK1 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.44■■□□□ 1.34
Snrnp25Q8VIK1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Snrnp25Q8VIK1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Snrnp25Q8VIK1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Snrnp25Q8VIK1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Snrnp25Q8VIK1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Snrnp25Q8VIK1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
Snrnp25Q8VIK1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Snrnp25Q8VIK1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Snrnp25Q8VIK1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Snrnp25Q8VIK1 Cap2-205ENSMUST00000225824 1634 ntBASIC23.42■■□□□ 1.34
Snrnp25Q8VIK1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.42■■□□□ 1.34
Snrnp25Q8VIK1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Snrnp25Q8VIK1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Snrnp25Q8VIK1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Snrnp25Q8VIK1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Snrnp25Q8VIK1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Snrnp25Q8VIK1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Snrnp25Q8VIK1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Snrnp25Q8VIK1 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.4■■□□□ 1.34
Snrnp25Q8VIK1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Snrnp25Q8VIK1 Gm7332-201ENSMUST00000118351 454 ntBASIC23.4■■□□□ 1.34
Snrnp25Q8VIK1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.4■■□□□ 1.34
Snrnp25Q8VIK1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Snrnp25Q8VIK1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.39■■□□□ 1.34
Snrnp25Q8VIK1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Snrnp25Q8VIK1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.39■■□□□ 1.33
Snrnp25Q8VIK1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Snrnp25Q8VIK1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Snrnp25Q8VIK1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
Snrnp25Q8VIK1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Snrnp25Q8VIK1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Snrnp25Q8VIK1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.37■■□□□ 1.33
Snrnp25Q8VIK1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.37■■□□□ 1.33
Snrnp25Q8VIK1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Snrnp25Q8VIK1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Snrnp25Q8VIK1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Snrnp25Q8VIK1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Snrnp25Q8VIK1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Snrnp25Q8VIK1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Snrnp25Q8VIK1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.36■■□□□ 1.33
Snrnp25Q8VIK1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Snrnp25Q8VIK1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Snrnp25Q8VIK1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Snrnp25Q8VIK1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Snrnp25Q8VIK1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Snrnp25Q8VIK1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.35■■□□□ 1.33
Snrnp25Q8VIK1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.35■■□□□ 1.33
Snrnp25Q8VIK1 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.35■■□□□ 1.33
Snrnp25Q8VIK1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Snrnp25Q8VIK1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Snrnp25Q8VIK1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Snrnp25Q8VIK1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.34■■□□□ 1.33
Snrnp25Q8VIK1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Snrnp25Q8VIK1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Snrnp25Q8VIK1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Snrnp25Q8VIK1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.33■■□□□ 1.33
Snrnp25Q8VIK1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Snrnp25Q8VIK1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Snrnp25Q8VIK1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 187.3 ms