Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Odf4Q8VI88 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.7■□□□□ 0.74
Odf4Q8VI88 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Odf4Q8VI88 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Odf4Q8VI88 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Odf4Q8VI88 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Odf4Q8VI88 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Odf4Q8VI88 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Odf4Q8VI88 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Odf4Q8VI88 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Odf4Q8VI88 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Odf4Q8VI88 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Odf4Q8VI88 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Odf4Q8VI88 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Odf4Q8VI88 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Odf4Q8VI88 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Odf4Q8VI88 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Odf4Q8VI88 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Odf4Q8VI88 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Odf4Q8VI88 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.66■□□□□ 0.74
Odf4Q8VI88 Gm45364-201ENSMUST00000210883 159 ntBASIC19.66■□□□□ 0.74
Odf4Q8VI88 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Odf4Q8VI88 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Odf4Q8VI88 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Odf4Q8VI88 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Odf4Q8VI88 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.65■□□□□ 0.74
Odf4Q8VI88 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Odf4Q8VI88 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Odf4Q8VI88 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Odf4Q8VI88 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Odf4Q8VI88 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Odf4Q8VI88 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Odf4Q8VI88 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Odf4Q8VI88 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Odf4Q8VI88 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Odf4Q8VI88 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Odf4Q8VI88 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Odf4Q8VI88 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Odf4Q8VI88 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Odf4Q8VI88 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Odf4Q8VI88 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Odf4Q8VI88 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Odf4Q8VI88 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.62■□□□□ 0.73
Odf4Q8VI88 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.62■□□□□ 0.73
Odf4Q8VI88 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.62■□□□□ 0.73
Odf4Q8VI88 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Odf4Q8VI88 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Odf4Q8VI88 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Odf4Q8VI88 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Odf4Q8VI88 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.61■□□□□ 0.73
Odf4Q8VI88 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Odf4Q8VI88 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.61■□□□□ 0.73
Odf4Q8VI88 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Odf4Q8VI88 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.6■□□□□ 0.73
Odf4Q8VI88 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.6■□□□□ 0.73
Odf4Q8VI88 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Odf4Q8VI88 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Odf4Q8VI88 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Odf4Q8VI88 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Odf4Q8VI88 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Odf4Q8VI88 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Odf4Q8VI88 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Odf4Q8VI88 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Odf4Q8VI88 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Odf4Q8VI88 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Odf4Q8VI88 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Odf4Q8VI88 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Odf4Q8VI88 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Odf4Q8VI88 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Odf4Q8VI88 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Odf4Q8VI88 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Odf4Q8VI88 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Odf4Q8VI88 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Odf4Q8VI88 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Odf4Q8VI88 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Odf4Q8VI88 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Odf4Q8VI88 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Odf4Q8VI88 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Odf4Q8VI88 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.55■□□□□ 0.72
Odf4Q8VI88 Gm12366-201ENSMUST00000121722 873 ntBASIC19.55■□□□□ 0.72
Odf4Q8VI88 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.55■□□□□ 0.72
Odf4Q8VI88 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.55■□□□□ 0.72
Odf4Q8VI88 Gm5786-201ENSMUST00000085368 882 ntBASIC19.55■□□□□ 0.72
Odf4Q8VI88 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Odf4Q8VI88 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.54■□□□□ 0.72
Odf4Q8VI88 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Odf4Q8VI88 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.54■□□□□ 0.72
Odf4Q8VI88 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Odf4Q8VI88 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Odf4Q8VI88 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Odf4Q8VI88 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Odf4Q8VI88 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Odf4Q8VI88 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Odf4Q8VI88 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Odf4Q8VI88 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.53■□□□□ 0.72
Odf4Q8VI88 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.53■□□□□ 0.72
Odf4Q8VI88 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Odf4Q8VI88 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Odf4Q8VI88 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.53■□□□□ 0.72
Odf4Q8VI88 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 1418 ms