Protein–RNA interactions for Protein: Q8VE99

Ccdc115, Coiled-coil domain-containing protein 115, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc115Q8VE99 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc115Q8VE99 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc115Q8VE99 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc115Q8VE99 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc115Q8VE99 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc115Q8VE99 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc115Q8VE99 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc115Q8VE99 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.5■□□□□ 0.71
Ccdc115Q8VE99 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc115Q8VE99 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc115Q8VE99 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc115Q8VE99 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc115Q8VE99 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.48■□□□□ 0.71
Ccdc115Q8VE99 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc115Q8VE99 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc115Q8VE99 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc115Q8VE99 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc115Q8VE99 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc115Q8VE99 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc115Q8VE99 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.47■□□□□ 0.71
Ccdc115Q8VE99 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc115Q8VE99 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc115Q8VE99 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc115Q8VE99 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc115Q8VE99 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc115Q8VE99 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc115Q8VE99 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc115Q8VE99 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc115Q8VE99 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc115Q8VE99 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc115Q8VE99 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.44■□□□□ 0.7
Ccdc115Q8VE99 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.44■□□□□ 0.7
Ccdc115Q8VE99 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc115Q8VE99 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc115Q8VE99 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc115Q8VE99 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc115Q8VE99 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc115Q8VE99 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc115Q8VE99 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc115Q8VE99 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc115Q8VE99 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc115Q8VE99 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc115Q8VE99 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc115Q8VE99 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc115Q8VE99 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc115Q8VE99 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc115Q8VE99 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc115Q8VE99 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc115Q8VE99 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc115Q8VE99 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc115Q8VE99 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc115Q8VE99 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc115Q8VE99 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc115Q8VE99 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc115Q8VE99 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc115Q8VE99 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc115Q8VE99 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc115Q8VE99 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc115Q8VE99 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc115Q8VE99 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc115Q8VE99 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Ccdc115Q8VE99 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc115Q8VE99 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc115Q8VE99 Gm6821-201ENSMUST00000107540 542 ntBASIC19.39■□□□□ 0.69
Ccdc115Q8VE99 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.39■□□□□ 0.69
Ccdc115Q8VE99 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc115Q8VE99 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc115Q8VE99 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc115Q8VE99 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.39■□□□□ 0.69
Ccdc115Q8VE99 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc115Q8VE99 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc115Q8VE99 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc115Q8VE99 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.38■□□□□ 0.69
Ccdc115Q8VE99 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc115Q8VE99 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc115Q8VE99 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc115Q8VE99 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.37■□□□□ 0.69
Ccdc115Q8VE99 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc115Q8VE99 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc115Q8VE99 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ccdc115Q8VE99 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc115Q8VE99 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc115Q8VE99 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.36■□□□□ 0.69
Ccdc115Q8VE99 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc115Q8VE99 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc115Q8VE99 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc115Q8VE99 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc115Q8VE99 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc115Q8VE99 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc115Q8VE99 Gm37136-201ENSMUST00000194368 194 ntBASIC19.34■□□□□ 0.69
Ccdc115Q8VE99 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc115Q8VE99 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc115Q8VE99 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ccdc115Q8VE99 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc115Q8VE99 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc115Q8VE99 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc115Q8VE99 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc115Q8VE99 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc115Q8VE99 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc115Q8VE99 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 120.9 ms