Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpusd1Q8VCZ8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rpusd1Q8VCZ8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpusd1Q8VCZ8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.55■■□□□ 1.04
Rpusd1Q8VCZ8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Rpusd1Q8VCZ8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpusd1Q8VCZ8 Gm13238-201ENSMUST00000117655 780 ntBASIC21.55■■□□□ 1.04
Rpusd1Q8VCZ8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.55■■□□□ 1.04
Rpusd1Q8VCZ8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpusd1Q8VCZ8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.55■■□□□ 1.04
Rpusd1Q8VCZ8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.55■■□□□ 1.04
Rpusd1Q8VCZ8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpusd1Q8VCZ8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpusd1Q8VCZ8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Rpusd1Q8VCZ8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpusd1Q8VCZ8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.54■■□□□ 1.04
Rpusd1Q8VCZ8 Gm45444-201ENSMUST00000211394 898 ntBASIC21.54■■□□□ 1.04
Rpusd1Q8VCZ8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.54■■□□□ 1.04
Rpusd1Q8VCZ8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpusd1Q8VCZ8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Rpusd1Q8VCZ8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rpusd1Q8VCZ8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpusd1Q8VCZ8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpusd1Q8VCZ8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpusd1Q8VCZ8 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.52■■□□□ 1.04
Rpusd1Q8VCZ8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.52■■□□□ 1.04
Rpusd1Q8VCZ8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rpusd1Q8VCZ8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.52■■□□□ 1.04
Rpusd1Q8VCZ8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.52■■□□□ 1.04
Rpusd1Q8VCZ8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rpusd1Q8VCZ8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.51■■□□□ 1.03
Rpusd1Q8VCZ8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpusd1Q8VCZ8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpusd1Q8VCZ8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpusd1Q8VCZ8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpusd1Q8VCZ8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Rpusd1Q8VCZ8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rpusd1Q8VCZ8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpusd1Q8VCZ8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpusd1Q8VCZ8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpusd1Q8VCZ8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpusd1Q8VCZ8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpusd1Q8VCZ8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rpusd1Q8VCZ8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rpusd1Q8VCZ8 Gm22567-201ENSMUST00000175542 342 ntBASIC21.48■■□□□ 1.03
Rpusd1Q8VCZ8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.48■■□□□ 1.03
Rpusd1Q8VCZ8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpusd1Q8VCZ8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpusd1Q8VCZ8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpusd1Q8VCZ8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rpusd1Q8VCZ8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Rpusd1Q8VCZ8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Rpusd1Q8VCZ8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpusd1Q8VCZ8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.47■■□□□ 1.03
Rpusd1Q8VCZ8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpusd1Q8VCZ8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpusd1Q8VCZ8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpusd1Q8VCZ8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Rpusd1Q8VCZ8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpusd1Q8VCZ8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpusd1Q8VCZ8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Rpusd1Q8VCZ8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Rpusd1Q8VCZ8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpusd1Q8VCZ8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
Rpusd1Q8VCZ8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpusd1Q8VCZ8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.45■■□□□ 1.02
Rpusd1Q8VCZ8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpusd1Q8VCZ8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpusd1Q8VCZ8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rpusd1Q8VCZ8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Rpusd1Q8VCZ8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpusd1Q8VCZ8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rpusd1Q8VCZ8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpusd1Q8VCZ8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Rpusd1Q8VCZ8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.43■■□□□ 1.02
Rpusd1Q8VCZ8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.43■■□□□ 1.02
Rpusd1Q8VCZ8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.43■■□□□ 1.02
Rpusd1Q8VCZ8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpusd1Q8VCZ8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpusd1Q8VCZ8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpusd1Q8VCZ8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpusd1Q8VCZ8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpusd1Q8VCZ8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpusd1Q8VCZ8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpusd1Q8VCZ8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Rpusd1Q8VCZ8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpusd1Q8VCZ8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rpusd1Q8VCZ8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rpusd1Q8VCZ8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rpusd1Q8VCZ8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.41■■□□□ 1.02
Rpusd1Q8VCZ8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Rpusd1Q8VCZ8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Rpusd1Q8VCZ8 Gm15820-201ENSMUST00000201566 728 ntBASIC21.4■■□□□ 1.02
Rpusd1Q8VCZ8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Rpusd1Q8VCZ8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.4■■□□□ 1.02
Rpusd1Q8VCZ8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Rpusd1Q8VCZ8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Rpusd1Q8VCZ8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.39■■□□□ 1.02
Rpusd1Q8VCZ8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Rpusd1Q8VCZ8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms