Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Upb1Q8VC97 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Upb1Q8VC97 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Upb1Q8VC97 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Upb1Q8VC97 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Upb1Q8VC97 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Upb1Q8VC97 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Upb1Q8VC97 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Upb1Q8VC97 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Upb1Q8VC97 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Upb1Q8VC97 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Upb1Q8VC97 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Upb1Q8VC97 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Upb1Q8VC97 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Upb1Q8VC97 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Upb1Q8VC97 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Upb1Q8VC97 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Upb1Q8VC97 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Upb1Q8VC97 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Upb1Q8VC97 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Upb1Q8VC97 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Upb1Q8VC97 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Upb1Q8VC97 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Upb1Q8VC97 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Upb1Q8VC97 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Upb1Q8VC97 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Upb1Q8VC97 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Upb1Q8VC97 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.34■■□□□ 1.49
Upb1Q8VC97 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Upb1Q8VC97 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Upb1Q8VC97 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.33■■□□□ 1.49
Upb1Q8VC97 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Upb1Q8VC97 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.32■■□□□ 1.48
Upb1Q8VC97 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Upb1Q8VC97 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Upb1Q8VC97 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Upb1Q8VC97 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Upb1Q8VC97 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.32■■□□□ 1.48
Upb1Q8VC97 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.31■■□□□ 1.48
Upb1Q8VC97 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.31■■□□□ 1.48
Upb1Q8VC97 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Upb1Q8VC97 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Upb1Q8VC97 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Upb1Q8VC97 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Upb1Q8VC97 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Upb1Q8VC97 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Upb1Q8VC97 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Upb1Q8VC97 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Upb1Q8VC97 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Upb1Q8VC97 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Upb1Q8VC97 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Upb1Q8VC97 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Upb1Q8VC97 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Upb1Q8VC97 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Upb1Q8VC97 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Upb1Q8VC97 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
Upb1Q8VC97 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Upb1Q8VC97 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Upb1Q8VC97 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.28■■□□□ 1.48
Upb1Q8VC97 Gm43592-201ENSMUST00000196922 1165 ntBASIC24.28■■□□□ 1.48
Upb1Q8VC97 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Upb1Q8VC97 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Upb1Q8VC97 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Upb1Q8VC97 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Upb1Q8VC97 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Upb1Q8VC97 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Upb1Q8VC97 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Upb1Q8VC97 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Upb1Q8VC97 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Upb1Q8VC97 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Upb1Q8VC97 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Upb1Q8VC97 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.25■■□□□ 1.47
Upb1Q8VC97 Gm5921-201ENSMUST00000075898 882 ntBASIC24.25■■□□□ 1.47
Upb1Q8VC97 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Upb1Q8VC97 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Upb1Q8VC97 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Upb1Q8VC97 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Upb1Q8VC97 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Upb1Q8VC97 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Upb1Q8VC97 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Upb1Q8VC97 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Upb1Q8VC97 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.23■■□□□ 1.47
Upb1Q8VC97 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Upb1Q8VC97 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Upb1Q8VC97 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Upb1Q8VC97 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Upb1Q8VC97 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Upb1Q8VC97 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Upb1Q8VC97 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Upb1Q8VC97 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Upb1Q8VC97 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Upb1Q8VC97 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Upb1Q8VC97 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Upb1Q8VC97 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Upb1Q8VC97 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.18■■□□□ 1.46
Upb1Q8VC97 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Upb1Q8VC97 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Upb1Q8VC97 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Upb1Q8VC97 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC24.18■■□□□ 1.46
Upb1Q8VC97 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms