Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Alms1Q8K4E0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Alms1Q8K4E0 Gm44428-201ENSMUST00000204474 874 ntBASIC22.14■■□□□ 1.13
Alms1Q8K4E0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.13■■□□□ 1.13
Alms1Q8K4E0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Alms1Q8K4E0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Alms1Q8K4E0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Alms1Q8K4E0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Alms1Q8K4E0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.12■■□□□ 1.13
Alms1Q8K4E0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Alms1Q8K4E0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Alms1Q8K4E0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Alms1Q8K4E0 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.11■■□□□ 1.13
Alms1Q8K4E0 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.11■■□□□ 1.13
Alms1Q8K4E0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Alms1Q8K4E0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.11■■□□□ 1.13
Alms1Q8K4E0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Alms1Q8K4E0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Alms1Q8K4E0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Alms1Q8K4E0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Alms1Q8K4E0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Alms1Q8K4E0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.09■■□□□ 1.13
Alms1Q8K4E0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Alms1Q8K4E0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Alms1Q8K4E0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Alms1Q8K4E0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Alms1Q8K4E0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.07■■□□□ 1.12
Alms1Q8K4E0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Alms1Q8K4E0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Alms1Q8K4E0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Alms1Q8K4E0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Alms1Q8K4E0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Alms1Q8K4E0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Alms1Q8K4E0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Alms1Q8K4E0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Alms1Q8K4E0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Alms1Q8K4E0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Alms1Q8K4E0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Alms1Q8K4E0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Alms1Q8K4E0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.06■■□□□ 1.12
Alms1Q8K4E0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.06■■□□□ 1.12
Alms1Q8K4E0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Alms1Q8K4E0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.06■■□□□ 1.12
Alms1Q8K4E0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Alms1Q8K4E0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Alms1Q8K4E0 Gm9959-201ENSMUST00000068277 390 ntBASIC22.05■■□□□ 1.12
Alms1Q8K4E0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Alms1Q8K4E0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Alms1Q8K4E0 Gm5297-201ENSMUST00000198555 1171 ntBASIC22.05■■□□□ 1.12
Alms1Q8K4E0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Alms1Q8K4E0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Alms1Q8K4E0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Alms1Q8K4E0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Alms1Q8K4E0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Alms1Q8K4E0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Alms1Q8K4E0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Alms1Q8K4E0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Alms1Q8K4E0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Alms1Q8K4E0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Alms1Q8K4E0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Alms1Q8K4E0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Alms1Q8K4E0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Alms1Q8K4E0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Alms1Q8K4E0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Alms1Q8K4E0 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.02■■□□□ 1.12
Alms1Q8K4E0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.01■■□□□ 1.11
Alms1Q8K4E0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.01■■□□□ 1.11
Alms1Q8K4E0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
Alms1Q8K4E0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Alms1Q8K4E0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22■■□□□ 1.11
Alms1Q8K4E0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22■■□□□ 1.11
Alms1Q8K4E0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Alms1Q8K4E0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Alms1Q8K4E0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Alms1Q8K4E0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.98■■□□□ 1.11
Alms1Q8K4E0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Alms1Q8K4E0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Alms1Q8K4E0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Alms1Q8K4E0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Alms1Q8K4E0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Alms1Q8K4E0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Alms1Q8K4E0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Alms1Q8K4E0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Alms1Q8K4E0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.96■■□□□ 1.11
Alms1Q8K4E0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Alms1Q8K4E0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
Alms1Q8K4E0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.95■■□□□ 1.1
Alms1Q8K4E0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.95■■□□□ 1.1
Alms1Q8K4E0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Alms1Q8K4E0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Alms1Q8K4E0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Alms1Q8K4E0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Alms1Q8K4E0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Alms1Q8K4E0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Alms1Q8K4E0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Alms1Q8K4E0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Alms1Q8K4E0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.94■■□□□ 1.1
Alms1Q8K4E0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Alms1Q8K4E0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Alms1Q8K4E0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms