Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Clip4Q8CI96 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Clip4Q8CI96 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Clip4Q8CI96 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Clip4Q8CI96 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Clip4Q8CI96 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Clip4Q8CI96 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Clip4Q8CI96 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Clip4Q8CI96 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Clip4Q8CI96 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Clip4Q8CI96 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
Clip4Q8CI96 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Clip4Q8CI96 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Clip4Q8CI96 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Clip4Q8CI96 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
Clip4Q8CI96 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Clip4Q8CI96 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Clip4Q8CI96 Scarna2-201ENSMUST00000157560 414 ntBASIC22.27■■□□□ 1.16
Clip4Q8CI96 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Clip4Q8CI96 Gm9812-201ENSMUST00000061934 968 ntBASIC22.27■■□□□ 1.16
Clip4Q8CI96 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Clip4Q8CI96 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Clip4Q8CI96 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Clip4Q8CI96 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Clip4Q8CI96 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Clip4Q8CI96 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Clip4Q8CI96 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Clip4Q8CI96 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.26■■□□□ 1.15
Clip4Q8CI96 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Clip4Q8CI96 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Clip4Q8CI96 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Clip4Q8CI96 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Clip4Q8CI96 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Clip4Q8CI96 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Clip4Q8CI96 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Clip4Q8CI96 Gm9806-201ENSMUST00000051080 552 ntBASIC22.24■■□□□ 1.15
Clip4Q8CI96 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Clip4Q8CI96 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Clip4Q8CI96 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Clip4Q8CI96 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Clip4Q8CI96 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Clip4Q8CI96 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Clip4Q8CI96 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.23■■□□□ 1.15
Clip4Q8CI96 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Clip4Q8CI96 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Clip4Q8CI96 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Clip4Q8CI96 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Clip4Q8CI96 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Clip4Q8CI96 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.22■■□□□ 1.15
Clip4Q8CI96 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.22■■□□□ 1.15
Clip4Q8CI96 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.22■■□□□ 1.15
Clip4Q8CI96 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Clip4Q8CI96 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Clip4Q8CI96 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Clip4Q8CI96 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Clip4Q8CI96 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.21■■□□□ 1.15
Clip4Q8CI96 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Clip4Q8CI96 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Clip4Q8CI96 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Clip4Q8CI96 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Clip4Q8CI96 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Clip4Q8CI96 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Clip4Q8CI96 Gm16437-201ENSMUST00000025669 507 ntBASIC22.2■■□□□ 1.14
Clip4Q8CI96 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Clip4Q8CI96 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Clip4Q8CI96 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Clip4Q8CI96 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Clip4Q8CI96 Gm11687-201ENSMUST00000118911 886 ntBASIC22.19■■□□□ 1.14
Clip4Q8CI96 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.19■■□□□ 1.14
Clip4Q8CI96 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Clip4Q8CI96 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.19■■□□□ 1.14
Clip4Q8CI96 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Clip4Q8CI96 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.19■■□□□ 1.14
Clip4Q8CI96 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Clip4Q8CI96 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Clip4Q8CI96 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Clip4Q8CI96 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Clip4Q8CI96 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Clip4Q8CI96 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Clip4Q8CI96 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Clip4Q8CI96 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Clip4Q8CI96 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Clip4Q8CI96 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Clip4Q8CI96 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Clip4Q8CI96 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.16■■□□□ 1.14
Clip4Q8CI96 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.15■■□□□ 1.14
Clip4Q8CI96 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Clip4Q8CI96 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Clip4Q8CI96 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Clip4Q8CI96 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Clip4Q8CI96 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Clip4Q8CI96 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Clip4Q8CI96 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Clip4Q8CI96 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
Clip4Q8CI96 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.13■■□□□ 1.13
Clip4Q8CI96 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Clip4Q8CI96 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Clip4Q8CI96 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.12■■□□□ 1.13
Clip4Q8CI96 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Clip4Q8CI96 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms