Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Smc2Q8CG48 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC25.43■■□□□ 1.66
Smc2Q8CG48 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.43■■□□□ 1.66
Smc2Q8CG48 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Smc2Q8CG48 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.42■■□□□ 1.66
Smc2Q8CG48 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Smc2Q8CG48 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Smc2Q8CG48 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Smc2Q8CG48 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Smc2Q8CG48 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Smc2Q8CG48 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Smc2Q8CG48 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Smc2Q8CG48 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Smc2Q8CG48 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Smc2Q8CG48 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Smc2Q8CG48 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.39■■□□□ 1.66
Smc2Q8CG48 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Smc2Q8CG48 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Smc2Q8CG48 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Smc2Q8CG48 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Smc2Q8CG48 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Smc2Q8CG48 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Smc2Q8CG48 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Smc2Q8CG48 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
Smc2Q8CG48 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Smc2Q8CG48 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.37■■□□□ 1.65
Smc2Q8CG48 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Smc2Q8CG48 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Smc2Q8CG48 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
Smc2Q8CG48 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.36■■□□□ 1.65
Smc2Q8CG48 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Smc2Q8CG48 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC25.35■■□□□ 1.65
Smc2Q8CG48 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Smc2Q8CG48 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Smc2Q8CG48 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Smc2Q8CG48 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Smc2Q8CG48 Gm6311-201ENSMUST00000073790 878 ntBASIC25.34■■□□□ 1.65
Smc2Q8CG48 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Smc2Q8CG48 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Smc2Q8CG48 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Smc2Q8CG48 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.33■■□□□ 1.65
Smc2Q8CG48 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Smc2Q8CG48 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Smc2Q8CG48 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Smc2Q8CG48 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Smc2Q8CG48 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Smc2Q8CG48 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Smc2Q8CG48 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Smc2Q8CG48 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Smc2Q8CG48 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Smc2Q8CG48 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Smc2Q8CG48 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Smc2Q8CG48 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Smc2Q8CG48 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Smc2Q8CG48 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.31■■□□□ 1.64
Smc2Q8CG48 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.31■■□□□ 1.64
Smc2Q8CG48 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Smc2Q8CG48 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Smc2Q8CG48 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Smc2Q8CG48 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Smc2Q8CG48 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.31■■□□□ 1.64
Smc2Q8CG48 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC25.3■■□□□ 1.64
Smc2Q8CG48 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Smc2Q8CG48 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Smc2Q8CG48 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Smc2Q8CG48 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Smc2Q8CG48 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.29■■□□□ 1.64
Smc2Q8CG48 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc2Q8CG48 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc2Q8CG48 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc2Q8CG48 H3f3aos-201ENSMUST00000097448 2905 ntBASIC25.29■■□□□ 1.64
Smc2Q8CG48 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
Smc2Q8CG48 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smc2Q8CG48 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC25.28■■□□□ 1.64
Smc2Q8CG48 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Smc2Q8CG48 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smc2Q8CG48 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Smc2Q8CG48 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Smc2Q8CG48 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Smc2Q8CG48 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Smc2Q8CG48 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Smc2Q8CG48 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Smc2Q8CG48 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Smc2Q8CG48 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Smc2Q8CG48 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Smc2Q8CG48 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
Smc2Q8CG48 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Smc2Q8CG48 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Smc2Q8CG48 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Smc2Q8CG48 Gm9910-201ENSMUST00000195385 1550 ntBASIC25.26■■□□□ 1.63
Smc2Q8CG48 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Smc2Q8CG48 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC25.25■■□□□ 1.63
Smc2Q8CG48 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smc2Q8CG48 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smc2Q8CG48 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smc2Q8CG48 Gm6934-201ENSMUST00000194780 1905 ntBASIC25.24■■□□□ 1.63
Smc2Q8CG48 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smc2Q8CG48 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smc2Q8CG48 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Smc2Q8CG48 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms