Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trim52Q8CDV4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Trim52Q8CDV4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Trim52Q8CDV4 Gm43566-201ENSMUST00000196851 808 ntBASIC28.15■■■□□ 2.1
Trim52Q8CDV4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Trim52Q8CDV4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Trim52Q8CDV4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Trim52Q8CDV4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Trim52Q8CDV4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Trim52Q8CDV4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Trim52Q8CDV4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Trim52Q8CDV4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC28.14■■■□□ 2.1
Trim52Q8CDV4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Trim52Q8CDV4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC28.13■■■□□ 2.09
Trim52Q8CDV4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
Trim52Q8CDV4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Trim52Q8CDV4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Trim52Q8CDV4 Gm45444-201ENSMUST00000211394 898 ntBASIC28.12■■■□□ 2.09
Trim52Q8CDV4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Trim52Q8CDV4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
Trim52Q8CDV4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Trim52Q8CDV4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trim52Q8CDV4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trim52Q8CDV4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trim52Q8CDV4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Gm15546-201ENSMUST00000122095 826 ntBASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 Gm5522-201ENSMUST00000189483 1242 ntBASIC28.09■■■□□ 2.09
Trim52Q8CDV4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trim52Q8CDV4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC28.08■■■□□ 2.09
Trim52Q8CDV4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trim52Q8CDV4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trim52Q8CDV4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trim52Q8CDV4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Trim52Q8CDV4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC28.07■■■□□ 2.08
Trim52Q8CDV4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Trim52Q8CDV4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Trim52Q8CDV4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Trim52Q8CDV4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC28.06■■■□□ 2.08
Trim52Q8CDV4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Trim52Q8CDV4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Trim52Q8CDV4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Trim52Q8CDV4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Trim52Q8CDV4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Trim52Q8CDV4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Trim52Q8CDV4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Trim52Q8CDV4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
Trim52Q8CDV4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Trim52Q8CDV4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Trim52Q8CDV4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Trim52Q8CDV4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Trim52Q8CDV4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Trim52Q8CDV4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Trim52Q8CDV4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.08
Trim52Q8CDV4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Trim52Q8CDV4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
Trim52Q8CDV4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC28.01■■■□□ 2.07
Trim52Q8CDV4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Trim52Q8CDV4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
Trim52Q8CDV4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28■■■□□ 2.07
Trim52Q8CDV4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Trim52Q8CDV4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Trim52Q8CDV4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Trim52Q8CDV4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Trim52Q8CDV4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC27.99■■■□□ 2.07
Trim52Q8CDV4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
Trim52Q8CDV4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Trim52Q8CDV4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC27.97■■■□□ 2.07
Trim52Q8CDV4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
Trim52Q8CDV4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Trim52Q8CDV4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Trim52Q8CDV4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.97■■■□□ 2.07
Trim52Q8CDV4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Trim52Q8CDV4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC27.96■■■□□ 2.07
Trim52Q8CDV4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC27.96■■■□□ 2.07
Trim52Q8CDV4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC27.96■■■□□ 2.07
Trim52Q8CDV4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Trim52Q8CDV4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
Trim52Q8CDV4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Trim52Q8CDV4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
Trim52Q8CDV4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trim52Q8CDV4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trim52Q8CDV4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trim52Q8CDV4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trim52Q8CDV4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.94■■■□□ 2.06
Trim52Q8CDV4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Trim52Q8CDV4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC27.93■■■□□ 2.06
Trim52Q8CDV4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
Trim52Q8CDV4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms