Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rfx6Q8C7R7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Rfx6Q8C7R7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfx6Q8C7R7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfx6Q8C7R7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfx6Q8C7R7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfx6Q8C7R7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfx6Q8C7R7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfx6Q8C7R7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfx6Q8C7R7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rfx6Q8C7R7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rfx6Q8C7R7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rfx6Q8C7R7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rfx6Q8C7R7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rfx6Q8C7R7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rfx6Q8C7R7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rfx6Q8C7R7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rfx6Q8C7R7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Rfx6Q8C7R7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rfx6Q8C7R7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rfx6Q8C7R7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rfx6Q8C7R7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rfx6Q8C7R7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rfx6Q8C7R7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.54■■□□□ 1.2
Rfx6Q8C7R7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
Rfx6Q8C7R7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rfx6Q8C7R7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Rfx6Q8C7R7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.53■■□□□ 1.2
Rfx6Q8C7R7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rfx6Q8C7R7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Rfx6Q8C7R7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rfx6Q8C7R7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Rfx6Q8C7R7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rfx6Q8C7R7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rfx6Q8C7R7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rfx6Q8C7R7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.52■■□□□ 1.2
Rfx6Q8C7R7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rfx6Q8C7R7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Rfx6Q8C7R7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Rfx6Q8C7R7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Rfx6Q8C7R7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rfx6Q8C7R7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rfx6Q8C7R7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rfx6Q8C7R7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.51■■□□□ 1.19
Rfx6Q8C7R7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.51■■□□□ 1.19
Rfx6Q8C7R7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rfx6Q8C7R7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rfx6Q8C7R7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rfx6Q8C7R7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rfx6Q8C7R7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rfx6Q8C7R7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.5■■□□□ 1.19
Rfx6Q8C7R7 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.5■■□□□ 1.19
Rfx6Q8C7R7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rfx6Q8C7R7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rfx6Q8C7R7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rfx6Q8C7R7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rfx6Q8C7R7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.49■■□□□ 1.19
Rfx6Q8C7R7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rfx6Q8C7R7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rfx6Q8C7R7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
Rfx6Q8C7R7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.48■■□□□ 1.19
Rfx6Q8C7R7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Rfx6Q8C7R7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rfx6Q8C7R7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.47■■□□□ 1.19
Rfx6Q8C7R7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rfx6Q8C7R7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rfx6Q8C7R7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rfx6Q8C7R7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.47■■□□□ 1.19
Rfx6Q8C7R7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.47■■□□□ 1.19
Rfx6Q8C7R7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rfx6Q8C7R7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rfx6Q8C7R7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rfx6Q8C7R7 Gm8503-201ENSMUST00000118131 455 ntBASIC22.46■■□□□ 1.19
Rfx6Q8C7R7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Rfx6Q8C7R7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.46■■□□□ 1.19
Rfx6Q8C7R7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Rfx6Q8C7R7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Rfx6Q8C7R7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Rfx6Q8C7R7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rfx6Q8C7R7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rfx6Q8C7R7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rfx6Q8C7R7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rfx6Q8C7R7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rfx6Q8C7R7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rfx6Q8C7R7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rfx6Q8C7R7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rfx6Q8C7R7 Gm4799-201ENSMUST00000095396 657 ntBASIC22.44■■□□□ 1.18
Rfx6Q8C7R7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rfx6Q8C7R7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rfx6Q8C7R7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.43■■□□□ 1.18
Rfx6Q8C7R7 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.43■■□□□ 1.18
Rfx6Q8C7R7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Rfx6Q8C7R7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Rfx6Q8C7R7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rfx6Q8C7R7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rfx6Q8C7R7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rfx6Q8C7R7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rfx6Q8C7R7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.42■■□□□ 1.18
Rfx6Q8C7R7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rfx6Q8C7R7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms