Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chd9Q8BYH8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd9Q8BYH8 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.09■□□□□ 0.49
Chd9Q8BYH8 Gm10232-201ENSMUST00000089221 720 ntBASIC18.09■□□□□ 0.49
Chd9Q8BYH8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd9Q8BYH8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chd9Q8BYH8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd9Q8BYH8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.07■□□□□ 0.48
Chd9Q8BYH8 Gm27454-201ENSMUST00000185090 204 ntBASIC18.07■□□□□ 0.48
Chd9Q8BYH8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd9Q8BYH8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd9Q8BYH8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chd9Q8BYH8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd9Q8BYH8 Gm12821-201ENSMUST00000120022 600 ntBASIC18.07■□□□□ 0.48
Chd9Q8BYH8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd9Q8BYH8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chd9Q8BYH8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd9Q8BYH8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.06■□□□□ 0.48
Chd9Q8BYH8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.06■□□□□ 0.48
Chd9Q8BYH8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd9Q8BYH8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Chd9Q8BYH8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd9Q8BYH8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chd9Q8BYH8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd9Q8BYH8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd9Q8BYH8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Chd9Q8BYH8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chd9Q8BYH8 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.04■□□□□ 0.48
Chd9Q8BYH8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd9Q8BYH8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd9Q8BYH8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Chd9Q8BYH8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chd9Q8BYH8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.03■□□□□ 0.48
Chd9Q8BYH8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chd9Q8BYH8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Chd9Q8BYH8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd9Q8BYH8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chd9Q8BYH8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.01■□□□□ 0.47
Chd9Q8BYH8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Chd9Q8BYH8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.01■□□□□ 0.47
Chd9Q8BYH8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Chd9Q8BYH8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Chd9Q8BYH8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd9Q8BYH8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd9Q8BYH8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Chd9Q8BYH8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd9Q8BYH8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Chd9Q8BYH8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Chd9Q8BYH8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
Chd9Q8BYH8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18■□□□□ 0.47
Chd9Q8BYH8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chd9Q8BYH8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Chd9Q8BYH8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Chd9Q8BYH8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd9Q8BYH8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd9Q8BYH8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Chd9Q8BYH8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.98■□□□□ 0.47
Chd9Q8BYH8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd9Q8BYH8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.98■□□□□ 0.47
Chd9Q8BYH8 Zxda-201ENSMUST00000117281 2621 ntBASIC17.98■□□□□ 0.47
Chd9Q8BYH8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd9Q8BYH8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Chd9Q8BYH8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd9Q8BYH8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd9Q8BYH8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Chd9Q8BYH8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd9Q8BYH8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd9Q8BYH8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Chd9Q8BYH8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd9Q8BYH8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd9Q8BYH8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd9Q8BYH8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd9Q8BYH8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd9Q8BYH8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd9Q8BYH8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.95■□□□□ 0.46
Chd9Q8BYH8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd9Q8BYH8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.94■□□□□ 0.46
Chd9Q8BYH8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd9Q8BYH8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd9Q8BYH8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Chd9Q8BYH8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd9Q8BYH8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd9Q8BYH8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd9Q8BYH8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.93■□□□□ 0.46
Chd9Q8BYH8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Chd9Q8BYH8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd9Q8BYH8 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.93■□□□□ 0.46
Chd9Q8BYH8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chd9Q8BYH8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Chd9Q8BYH8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd9Q8BYH8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chd9Q8BYH8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.92■□□□□ 0.46
Chd9Q8BYH8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chd9Q8BYH8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd9Q8BYH8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd9Q8BYH8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.92■□□□□ 0.46
Chd9Q8BYH8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd9Q8BYH8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd9Q8BYH8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd9Q8BYH8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms