Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpne3Q8BT60 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.39■■□□□ 1.01
Cpne3Q8BT60 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne3Q8BT60 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne3Q8BT60 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne3Q8BT60 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cpne3Q8BT60 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne3Q8BT60 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne3Q8BT60 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Cpne3Q8BT60 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cpne3Q8BT60 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cpne3Q8BT60 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.37■■□□□ 1.01
Cpne3Q8BT60 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.37■■□□□ 1.01
Cpne3Q8BT60 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cpne3Q8BT60 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cpne3Q8BT60 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Cpne3Q8BT60 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Cpne3Q8BT60 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cpne3Q8BT60 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.35■■□□□ 1.01
Cpne3Q8BT60 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cpne3Q8BT60 Gm11599-201ENSMUST00000118720 878 ntBASIC21.34■■□□□ 1.01
Cpne3Q8BT60 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.34■■□□□ 1.01
Cpne3Q8BT60 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cpne3Q8BT60 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cpne3Q8BT60 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cpne3Q8BT60 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Cpne3Q8BT60 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cpne3Q8BT60 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cpne3Q8BT60 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cpne3Q8BT60 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cpne3Q8BT60 Mir3960-201ENSMUST00000198213 73 ntBASIC21.32■■□□□ 1
Cpne3Q8BT60 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Cpne3Q8BT60 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cpne3Q8BT60 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cpne3Q8BT60 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Cpne3Q8BT60 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cpne3Q8BT60 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Cpne3Q8BT60 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cpne3Q8BT60 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cpne3Q8BT60 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Cpne3Q8BT60 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Cpne3Q8BT60 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cpne3Q8BT60 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cpne3Q8BT60 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Cpne3Q8BT60 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cpne3Q8BT60 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Cpne3Q8BT60 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cpne3Q8BT60 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cpne3Q8BT60 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cpne3Q8BT60 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.28■■□□□ 1
Cpne3Q8BT60 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.28■■□□□ 1
Cpne3Q8BT60 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
Cpne3Q8BT60 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cpne3Q8BT60 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cpne3Q8BT60 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cpne3Q8BT60 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Cpne3Q8BT60 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cpne3Q8BT60 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cpne3Q8BT60 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Cpne3Q8BT60 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Cpne3Q8BT60 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cpne3Q8BT60 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cpne3Q8BT60 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpne3Q8BT60 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Cpne3Q8BT60 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpne3Q8BT60 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Cpne3Q8BT60 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cpne3Q8BT60 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cpne3Q8BT60 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpne3Q8BT60 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.25■□□□□ 0.99
Cpne3Q8BT60 Gm9812-201ENSMUST00000061934 968 ntBASIC21.25■□□□□ 0.99
Cpne3Q8BT60 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpne3Q8BT60 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cpne3Q8BT60 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpne3Q8BT60 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cpne3Q8BT60 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpne3Q8BT60 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.24■□□□□ 0.99
Cpne3Q8BT60 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cpne3Q8BT60 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cpne3Q8BT60 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpne3Q8BT60 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpne3Q8BT60 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cpne3Q8BT60 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.23■□□□□ 0.99
Cpne3Q8BT60 Gm45364-201ENSMUST00000210883 159 ntBASIC21.23■□□□□ 0.99
Cpne3Q8BT60 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpne3Q8BT60 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.23■□□□□ 0.99
Cpne3Q8BT60 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpne3Q8BT60 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpne3Q8BT60 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpne3Q8BT60 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.23■□□□□ 0.99
Cpne3Q8BT60 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.23■□□□□ 0.99
Cpne3Q8BT60 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpne3Q8BT60 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cpne3Q8BT60 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpne3Q8BT60 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.22■□□□□ 0.99
Cpne3Q8BT60 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpne3Q8BT60 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cpne3Q8BT60 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.22■□□□□ 0.99
Cpne3Q8BT60 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cpne3Q8BT60 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms